Protein–RNA interactions for Protein: Q8WWL7

CCNB3, G2/mitotic-specific cyclin-B3, humanhuman

Predictions only

Length 1,395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNB3Q8WWL7 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC24.89■■□□□ 1.57
CCNB3Q8WWL7 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC24.89■■□□□ 1.57
CCNB3Q8WWL7 RN7SL837P-201ENST00000463010 287 ntBASIC24.89■■□□□ 1.57
CCNB3Q8WWL7 PTK7-212ENST00000476760 902 ntTSL 2 BASIC24.89■■□□□ 1.57
CCNB3Q8WWL7 ELK1P1-201ENST00000485699 580 ntBASIC24.89■■□□□ 1.57
CCNB3Q8WWL7 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC24.89■■□□□ 1.57
CCNB3Q8WWL7 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC24.89■■□□□ 1.57
CCNB3Q8WWL7 IFT20-216ENST00000588477 774 ntTSL 5 BASIC24.89■■□□□ 1.57
CCNB3Q8WWL7 AC074044.1-201ENST00000609673 707 ntBASIC24.89■■□□□ 1.57
CCNB3Q8WWL7 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC24.89■■□□□ 1.57
CCNB3Q8WWL7 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC24.89■■□□□ 1.57
CCNB3Q8WWL7 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC24.89■■□□□ 1.57
CCNB3Q8WWL7 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC24.89■■□□□ 1.57
CCNB3Q8WWL7 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC24.89■■□□□ 1.57
CCNB3Q8WWL7 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC24.89■■□□□ 1.57
CCNB3Q8WWL7 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC24.89■■□□□ 1.57
CCNB3Q8WWL7 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC24.89■■□□□ 1.57
CCNB3Q8WWL7 AL136982.4-201ENST00000437689 1740 ntBASIC24.89■■□□□ 1.57
CCNB3Q8WWL7 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
CCNB3Q8WWL7 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC24.89■■□□□ 1.57
CCNB3Q8WWL7 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC24.88■■□□□ 1.57
CCNB3Q8WWL7 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC24.88■■□□□ 1.57
CCNB3Q8WWL7 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC24.88■■□□□ 1.57
CCNB3Q8WWL7 CYP4F24P-201ENST00000586049 1580 ntBASIC24.88■■□□□ 1.57
CCNB3Q8WWL7 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC24.88■■□□□ 1.57
CCNB3Q8WWL7 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
CCNB3Q8WWL7 U82695.1-201ENST00000635752 1889 ntBASIC24.88■■□□□ 1.57
CCNB3Q8WWL7 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC24.88■■□□□ 1.57
CCNB3Q8WWL7 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC24.88■■□□□ 1.57
CCNB3Q8WWL7 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
CCNB3Q8WWL7 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC24.88■■□□□ 1.57
CCNB3Q8WWL7 AC098850.1-201ENST00000419919 790 ntBASIC24.88■■□□□ 1.57
CCNB3Q8WWL7 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC24.88■■□□□ 1.57
CCNB3Q8WWL7 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
CCNB3Q8WWL7 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC24.88■■□□□ 1.57
CCNB3Q8WWL7 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC24.88■■□□□ 1.57
CCNB3Q8WWL7 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
CCNB3Q8WWL7 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC24.88■■□□□ 1.57
CCNB3Q8WWL7 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
CCNB3Q8WWL7 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC24.88■■□□□ 1.57
CCNB3Q8WWL7 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC24.88■■□□□ 1.57
CCNB3Q8WWL7 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC24.87■■□□□ 1.57
CCNB3Q8WWL7 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC24.87■■□□□ 1.57
CCNB3Q8WWL7 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC24.87■■□□□ 1.57
CCNB3Q8WWL7 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
CCNB3Q8WWL7 PCDHA14-201ENST00000506751 2298 ntBASIC24.87■■□□□ 1.57
CCNB3Q8WWL7 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
CCNB3Q8WWL7 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC24.87■■□□□ 1.57
CCNB3Q8WWL7 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
CCNB3Q8WWL7 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
CCNB3Q8WWL7 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
CCNB3Q8WWL7 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
CCNB3Q8WWL7 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
CCNB3Q8WWL7 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC24.87■■□□□ 1.57
CCNB3Q8WWL7 MEP1AP4-201ENST00000423244 1087 ntBASIC24.87■■□□□ 1.57
CCNB3Q8WWL7 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC24.87■■□□□ 1.57
CCNB3Q8WWL7 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
CCNB3Q8WWL7 ACA64.2-201ENST00000459014 129 ntBASIC24.87■■□□□ 1.57
CCNB3Q8WWL7 AC011495.1-201ENST00000498085 584 ntBASIC24.87■■□□□ 1.57
CCNB3Q8WWL7 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC24.87■■□□□ 1.57
CCNB3Q8WWL7 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
CCNB3Q8WWL7 REXO1L8P-201ENST00000604378 1897 ntBASIC24.87■■□□□ 1.57
CCNB3Q8WWL7 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
CCNB3Q8WWL7 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
CCNB3Q8WWL7 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC24.87■■□□□ 1.57
CCNB3Q8WWL7 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
CCNB3Q8WWL7 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC24.86■■□□□ 1.57
CCNB3Q8WWL7 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC24.86■■□□□ 1.57
CCNB3Q8WWL7 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
CCNB3Q8WWL7 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC24.86■■□□□ 1.57
CCNB3Q8WWL7 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC24.86■■□□□ 1.57
CCNB3Q8WWL7 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC24.86■■□□□ 1.57
CCNB3Q8WWL7 MXI1-205ENST00000393134 889 ntTSL 2 BASIC24.86■■□□□ 1.57
CCNB3Q8WWL7 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC24.86■■□□□ 1.57
CCNB3Q8WWL7 MYCLP2-201ENST00000449268 967 ntBASIC24.86■■□□□ 1.57
CCNB3Q8WWL7 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC24.86■■□□□ 1.57
CCNB3Q8WWL7 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC24.86■■□□□ 1.57
CCNB3Q8WWL7 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC24.86■■□□□ 1.57
CCNB3Q8WWL7 AC123567.1-201ENST00000548294 1261 ntBASIC24.86■■□□□ 1.57
CCNB3Q8WWL7 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC24.86■■□□□ 1.57
CCNB3Q8WWL7 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC24.86■■□□□ 1.57
CCNB3Q8WWL7 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC24.86■■□□□ 1.57
CCNB3Q8WWL7 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC24.86■■□□□ 1.57
CCNB3Q8WWL7 CTBP2P3-201ENST00000585629 1255 ntBASIC24.86■■□□□ 1.57
CCNB3Q8WWL7 AL162274.1-201ENST00000617191 1098 ntBASIC24.86■■□□□ 1.57
CCNB3Q8WWL7 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC24.86■■□□□ 1.57
CCNB3Q8WWL7 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC24.86■■□□□ 1.57
CCNB3Q8WWL7 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
CCNB3Q8WWL7 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC24.86■■□□□ 1.57
CCNB3Q8WWL7 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
CCNB3Q8WWL7 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC24.86■■□□□ 1.57
CCNB3Q8WWL7 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC24.86■■□□□ 1.57
CCNB3Q8WWL7 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC24.86■■□□□ 1.57
CCNB3Q8WWL7 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC24.86■■□□□ 1.57
CCNB3Q8WWL7 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
CCNB3Q8WWL7 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC24.85■■□□□ 1.57
CCNB3Q8WWL7 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC24.85■■□□□ 1.57
CCNB3Q8WWL7 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
CCNB3Q8WWL7 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC24.85■■□□□ 1.57
CCNB3Q8WWL7 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms