Protein–RNA interactions for Protein: Q8TBC4

UBA3, NEDD8-activating enzyme E1 catalytic subunit, humanhuman

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3Q8TBC4 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
UBA3Q8TBC4 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
UBA3Q8TBC4 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
UBA3Q8TBC4 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
UBA3Q8TBC4 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
UBA3Q8TBC4 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC17.31■□□□□ 0.36
UBA3Q8TBC4 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC17.31■□□□□ 0.36
UBA3Q8TBC4 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
UBA3Q8TBC4 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
UBA3Q8TBC4 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
UBA3Q8TBC4 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
UBA3Q8TBC4 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
UBA3Q8TBC4 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
UBA3Q8TBC4 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC17.3■□□□□ 0.36
UBA3Q8TBC4 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
UBA3Q8TBC4 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
UBA3Q8TBC4 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
UBA3Q8TBC4 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
UBA3Q8TBC4 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
UBA3Q8TBC4 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC17.3■□□□□ 0.36
UBA3Q8TBC4 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC17.3■□□□□ 0.36
UBA3Q8TBC4 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
UBA3Q8TBC4 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC17.3■□□□□ 0.36
UBA3Q8TBC4 AC098859.1-201ENST00000502915 1238 ntBASIC17.3■□□□□ 0.36
UBA3Q8TBC4 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC17.3■□□□□ 0.36
UBA3Q8TBC4 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC17.3■□□□□ 0.36
UBA3Q8TBC4 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC17.3■□□□□ 0.36
UBA3Q8TBC4 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC17.3■□□□□ 0.36
UBA3Q8TBC4 GPALPP1-207ENST00000611650 899 ntBASIC17.3■□□□□ 0.36
UBA3Q8TBC4 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
UBA3Q8TBC4 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
UBA3Q8TBC4 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC17.3■□□□□ 0.36
UBA3Q8TBC4 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
UBA3Q8TBC4 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
UBA3Q8TBC4 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
UBA3Q8TBC4 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
UBA3Q8TBC4 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
UBA3Q8TBC4 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC17.3■□□□□ 0.36
UBA3Q8TBC4 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
UBA3Q8TBC4 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
UBA3Q8TBC4 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
UBA3Q8TBC4 GOLGA6L17P-202ENST00000614358 1398 ntBASIC17.29■□□□□ 0.36
UBA3Q8TBC4 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
UBA3Q8TBC4 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
UBA3Q8TBC4 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
UBA3Q8TBC4 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
UBA3Q8TBC4 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC17.29■□□□□ 0.36
UBA3Q8TBC4 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
UBA3Q8TBC4 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
UBA3Q8TBC4 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
UBA3Q8TBC4 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
UBA3Q8TBC4 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
UBA3Q8TBC4 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
UBA3Q8TBC4 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
UBA3Q8TBC4 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
UBA3Q8TBC4 PP14571-201ENST00000404327 934 ntTSL 2 BASIC17.29■□□□□ 0.36
UBA3Q8TBC4 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC17.29■□□□□ 0.36
UBA3Q8TBC4 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC17.29■□□□□ 0.36
UBA3Q8TBC4 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
UBA3Q8TBC4 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC17.29■□□□□ 0.36
UBA3Q8TBC4 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC17.29■□□□□ 0.36
UBA3Q8TBC4 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
UBA3Q8TBC4 TSFM-210ENST00000550559 897 ntTSL 5 BASIC17.29■□□□□ 0.36
UBA3Q8TBC4 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC17.29■□□□□ 0.36
UBA3Q8TBC4 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC17.29■□□□□ 0.36
UBA3Q8TBC4 AC084121.4-201ENST00000641598 221 ntBASIC17.29■□□□□ 0.36
UBA3Q8TBC4 AC079781.4-201ENST00000641908 219 ntBASIC17.29■□□□□ 0.36
UBA3Q8TBC4 AF228730.8-201ENST00000642140 221 ntBASIC17.29■□□□□ 0.36
UBA3Q8TBC4 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
UBA3Q8TBC4 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC17.29■□□□□ 0.36
UBA3Q8TBC4 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
UBA3Q8TBC4 AL596087.1-201ENST00000400979 1969 ntBASIC17.29■□□□□ 0.36
UBA3Q8TBC4 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC17.29■□□□□ 0.36
UBA3Q8TBC4 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
UBA3Q8TBC4 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
UBA3Q8TBC4 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC17.29■□□□□ 0.36
UBA3Q8TBC4 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC17.29■□□□□ 0.36
UBA3Q8TBC4 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC17.29■□□□□ 0.36
UBA3Q8TBC4 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
UBA3Q8TBC4 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
UBA3Q8TBC4 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC17.29■□□□□ 0.36
UBA3Q8TBC4 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
UBA3Q8TBC4 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
UBA3Q8TBC4 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC17.28■□□□□ 0.36
UBA3Q8TBC4 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC17.28■□□□□ 0.36
UBA3Q8TBC4 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
UBA3Q8TBC4 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC17.28■□□□□ 0.36
UBA3Q8TBC4 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC17.28■□□□□ 0.36
UBA3Q8TBC4 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
UBA3Q8TBC4 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
UBA3Q8TBC4 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
UBA3Q8TBC4 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
UBA3Q8TBC4 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
UBA3Q8TBC4 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC17.28■□□□□ 0.36
UBA3Q8TBC4 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
UBA3Q8TBC4 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
UBA3Q8TBC4 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
UBA3Q8TBC4 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC17.28■□□□□ 0.36
UBA3Q8TBC4 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
UBA3Q8TBC4 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms