Protein–RNA interactions for Protein: Q8TAB3

PCDH19, Protocadherin-19, humanhuman

Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19Q8TAB3 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC16.86■□□□□ 0.29
PCDH19Q8TAB3 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
PCDH19Q8TAB3 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PCDH19Q8TAB3 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC16.86■□□□□ 0.29
PCDH19Q8TAB3 AL671277.1-201ENST00000429656 993 ntBASIC16.86■□□□□ 0.29
PCDH19Q8TAB3 ADH5P3-201ENST00000433842 1137 ntBASIC16.86■□□□□ 0.29
PCDH19Q8TAB3 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PCDH19Q8TAB3 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC16.86■□□□□ 0.29
PCDH19Q8TAB3 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
PCDH19Q8TAB3 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC16.86■□□□□ 0.29
PCDH19Q8TAB3 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC16.86■□□□□ 0.29
PCDH19Q8TAB3 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC16.86■□□□□ 0.29
PCDH19Q8TAB3 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC16.86■□□□□ 0.29
PCDH19Q8TAB3 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
PCDH19Q8TAB3 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC16.86■□□□□ 0.29
PCDH19Q8TAB3 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PCDH19Q8TAB3 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC16.86■□□□□ 0.29
PCDH19Q8TAB3 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PCDH19Q8TAB3 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PCDH19Q8TAB3 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PCDH19Q8TAB3 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC16.86■□□□□ 0.29
PCDH19Q8TAB3 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC16.86■□□□□ 0.29
PCDH19Q8TAB3 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
PCDH19Q8TAB3 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PCDH19Q8TAB3 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
PCDH19Q8TAB3 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PCDH19Q8TAB3 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PCDH19Q8TAB3 PAUPAR-201ENST00000630360 2965 ntBASIC16.86■□□□□ 0.29
PCDH19Q8TAB3 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
PCDH19Q8TAB3 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PCDH19Q8TAB3 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC16.85■□□□□ 0.29
PCDH19Q8TAB3 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PCDH19Q8TAB3 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC16.85■□□□□ 0.29
PCDH19Q8TAB3 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PCDH19Q8TAB3 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PCDH19Q8TAB3 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC16.85■□□□□ 0.29
PCDH19Q8TAB3 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PCDH19Q8TAB3 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
PCDH19Q8TAB3 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC16.85■□□□□ 0.29
PCDH19Q8TAB3 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PCDH19Q8TAB3 NEK7-201ENST00000367383 586 ntTSL 2 BASIC16.85■□□□□ 0.29
PCDH19Q8TAB3 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC16.85■□□□□ 0.29
PCDH19Q8TAB3 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC16.85■□□□□ 0.29
PCDH19Q8TAB3 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC16.85■□□□□ 0.29
PCDH19Q8TAB3 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC16.85■□□□□ 0.29
PCDH19Q8TAB3 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PCDH19Q8TAB3 MIR4469-201ENST00000583919 79 ntBASIC16.85■□□□□ 0.29
PCDH19Q8TAB3 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC16.85■□□□□ 0.29
PCDH19Q8TAB3 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC16.85■□□□□ 0.29
PCDH19Q8TAB3 AC073389.1-201ENST00000595595 795 ntBASIC16.85■□□□□ 0.29
PCDH19Q8TAB3 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC16.85■□□□□ 0.29
PCDH19Q8TAB3 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
PCDH19Q8TAB3 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PCDH19Q8TAB3 AKAP8P1-201ENST00000434743 1349 ntBASIC16.85■□□□□ 0.29
PCDH19Q8TAB3 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PCDH19Q8TAB3 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
PCDH19Q8TAB3 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PCDH19Q8TAB3 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC16.85■□□□□ 0.29
PCDH19Q8TAB3 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
PCDH19Q8TAB3 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PCDH19Q8TAB3 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PCDH19Q8TAB3 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC16.85■□□□□ 0.29
PCDH19Q8TAB3 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PCDH19Q8TAB3 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PCDH19Q8TAB3 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC16.85■□□□□ 0.29
PCDH19Q8TAB3 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PCDH19Q8TAB3 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PCDH19Q8TAB3 FOXO1B-201ENST00000504678 1527 ntBASIC16.85■□□□□ 0.29
PCDH19Q8TAB3 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC16.85■□□□□ 0.29
PCDH19Q8TAB3 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC16.85■□□□□ 0.29
PCDH19Q8TAB3 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PCDH19Q8TAB3 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
PCDH19Q8TAB3 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC16.84■□□□□ 0.29
PCDH19Q8TAB3 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PCDH19Q8TAB3 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC16.84■□□□□ 0.29
PCDH19Q8TAB3 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PCDH19Q8TAB3 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC16.84■□□□□ 0.29
PCDH19Q8TAB3 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PCDH19Q8TAB3 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC16.84■□□□□ 0.29
PCDH19Q8TAB3 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PCDH19Q8TAB3 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PCDH19Q8TAB3 ABR-203ENST00000536794 2213 ntTSL 2 BASIC16.84■□□□□ 0.29
PCDH19Q8TAB3 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PCDH19Q8TAB3 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PCDH19Q8TAB3 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC16.84■□□□□ 0.29
PCDH19Q8TAB3 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PCDH19Q8TAB3 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PCDH19Q8TAB3 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PCDH19Q8TAB3 TFAMP1-201ENST00000412727 736 ntBASIC16.84■□□□□ 0.29
PCDH19Q8TAB3 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC16.84■□□□□ 0.29
PCDH19Q8TAB3 AP006288.1-201ENST00000446065 395 ntBASIC16.84■□□□□ 0.29
PCDH19Q8TAB3 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC16.84■□□□□ 0.29
PCDH19Q8TAB3 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC16.84■□□□□ 0.29
PCDH19Q8TAB3 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC16.84■□□□□ 0.29
PCDH19Q8TAB3 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC16.84■□□□□ 0.29
PCDH19Q8TAB3 AL135744.1-201ENST00000565098 629 ntBASIC16.84■□□□□ 0.29
PCDH19Q8TAB3 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC16.84■□□□□ 0.29
PCDH19Q8TAB3 AL596442.2-201ENST00000610240 980 ntBASIC16.84■□□□□ 0.29
PCDH19Q8TAB3 C20orf181-201ENST00000623918 480 ntBASIC16.84■□□□□ 0.29
PCDH19Q8TAB3 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC16.84■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms