Protein–RNA interactions for Protein: Q8N609

TRAM1L1, Translocating chain-associated membrane protein 1-like 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1L1Q8N609 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC16.1■□□□□ 0.17
TRAM1L1Q8N609 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
TRAM1L1Q8N609 AL662844.4-201ENST00000606367 2838 ntBASIC16.1■□□□□ 0.17
TRAM1L1Q8N609 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRAM1L1Q8N609 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
TRAM1L1Q8N609 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRAM1L1Q8N609 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRAM1L1Q8N609 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRAM1L1Q8N609 CROCCP1-201ENST00000426910 5675 ntBASIC16.1■□□□□ 0.17
TRAM1L1Q8N609 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRAM1L1Q8N609 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
TRAM1L1Q8N609 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRAM1L1Q8N609 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
TRAM1L1Q8N609 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TRAM1L1Q8N609 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRAM1L1Q8N609 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRAM1L1Q8N609 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRAM1L1Q8N609 PNMT-202ENST00000394246 821 ntTSL 2 BASIC16.1■□□□□ 0.17
TRAM1L1Q8N609 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRAM1L1Q8N609 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC16.1■□□□□ 0.17
TRAM1L1Q8N609 AC051619.7-201ENST00000568314 623 ntBASIC16.1■□□□□ 0.17
TRAM1L1Q8N609 NAA38-207ENST00000576861 556 ntTSL 3 BASIC16.1■□□□□ 0.17
TRAM1L1Q8N609 PAM16-215ENST00000577031 548 ntTSL 4 BASIC16.1■□□□□ 0.17
TRAM1L1Q8N609 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC16.1■□□□□ 0.17
TRAM1L1Q8N609 AC026979.3-201ENST00000607315 403 ntBASIC16.1■□□□□ 0.17
TRAM1L1Q8N609 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
TRAM1L1Q8N609 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC16.1■□□□□ 0.17
TRAM1L1Q8N609 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC16.1■□□□□ 0.17
TRAM1L1Q8N609 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC16.1■□□□□ 0.17
TRAM1L1Q8N609 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRAM1L1Q8N609 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TRAM1L1Q8N609 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRAM1L1Q8N609 AL035456.1-201ENST00000456064 1369 ntBASIC16.1■□□□□ 0.17
TRAM1L1Q8N609 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
TRAM1L1Q8N609 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TRAM1L1Q8N609 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRAM1L1Q8N609 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
TRAM1L1Q8N609 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
TRAM1L1Q8N609 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC16.09■□□□□ 0.17
TRAM1L1Q8N609 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC16.09■□□□□ 0.17
TRAM1L1Q8N609 CYP2T1P-202ENST00000641596 2535 ntBASIC16.09■□□□□ 0.17
TRAM1L1Q8N609 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TRAM1L1Q8N609 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC16.09■□□□□ 0.17
TRAM1L1Q8N609 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRAM1L1Q8N609 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRAM1L1Q8N609 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
TRAM1L1Q8N609 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TRAM1L1Q8N609 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRAM1L1Q8N609 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRAM1L1Q8N609 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TRAM1L1Q8N609 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRAM1L1Q8N609 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TRAM1L1Q8N609 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TRAM1L1Q8N609 KLF2P3-201ENST00000451977 1087 ntBASIC16.09■□□□□ 0.17
TRAM1L1Q8N609 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC16.09■□□□□ 0.17
TRAM1L1Q8N609 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC16.09■□□□□ 0.17
TRAM1L1Q8N609 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC16.09■□□□□ 0.17
TRAM1L1Q8N609 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC16.09■□□□□ 0.17
TRAM1L1Q8N609 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC16.09■□□□□ 0.17
TRAM1L1Q8N609 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC16.09■□□□□ 0.17
TRAM1L1Q8N609 AC105021.1-202ENST00000570572 669 ntBASIC16.09■□□□□ 0.17
TRAM1L1Q8N609 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC16.09■□□□□ 0.17
TRAM1L1Q8N609 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRAM1L1Q8N609 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC16.09■□□□□ 0.17
TRAM1L1Q8N609 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRAM1L1Q8N609 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
TRAM1L1Q8N609 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRAM1L1Q8N609 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRAM1L1Q8N609 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRAM1L1Q8N609 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC16.09■□□□□ 0.17
TRAM1L1Q8N609 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRAM1L1Q8N609 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
TRAM1L1Q8N609 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRAM1L1Q8N609 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRAM1L1Q8N609 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRAM1L1Q8N609 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
TRAM1L1Q8N609 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRAM1L1Q8N609 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRAM1L1Q8N609 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRAM1L1Q8N609 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
TRAM1L1Q8N609 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC16.09■□□□□ 0.17
TRAM1L1Q8N609 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRAM1L1Q8N609 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRAM1L1Q8N609 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRAM1L1Q8N609 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
TRAM1L1Q8N609 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC16.09■□□□□ 0.17
TRAM1L1Q8N609 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
TRAM1L1Q8N609 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC16.08■□□□□ 0.17
TRAM1L1Q8N609 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
TRAM1L1Q8N609 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
TRAM1L1Q8N609 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC16.08■□□□□ 0.17
TRAM1L1Q8N609 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
TRAM1L1Q8N609 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC16.08■□□□□ 0.17
TRAM1L1Q8N609 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
TRAM1L1Q8N609 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC16.08■□□□□ 0.17
TRAM1L1Q8N609 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
TRAM1L1Q8N609 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.17
TRAM1L1Q8N609 F11R-206ENST00000621309 4770 ntTSL 5 BASIC16.08■□□□□ 0.17
TRAM1L1Q8N609 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
TRAM1L1Q8N609 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 60.7 ms