Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CDKL3Q8IVW4 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDKL3Q8IVW4 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC16.81■□□□□ 0.28
CDKL3Q8IVW4 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
CDKL3Q8IVW4 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDKL3Q8IVW4 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDKL3Q8IVW4 AC046158.3-201ENST00000624947 2558 ntBASIC16.81■□□□□ 0.28
CDKL3Q8IVW4 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
CDKL3Q8IVW4 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDKL3Q8IVW4 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
CDKL3Q8IVW4 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC16.81■□□□□ 0.28
CDKL3Q8IVW4 RPL13AP23-201ENST00000480739 586 ntBASIC16.81■□□□□ 0.28
CDKL3Q8IVW4 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC16.81■□□□□ 0.28
CDKL3Q8IVW4 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC16.81■□□□□ 0.28
CDKL3Q8IVW4 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC16.81■□□□□ 0.28
CDKL3Q8IVW4 KLK8-205ENST00000593490 267 ntTSL 3 BASIC16.81■□□□□ 0.28
CDKL3Q8IVW4 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
CDKL3Q8IVW4 SUPT20HL2-201ENST00000486479 2409 ntBASIC16.81■□□□□ 0.28
CDKL3Q8IVW4 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDKL3Q8IVW4 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDKL3Q8IVW4 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
CDKL3Q8IVW4 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDKL3Q8IVW4 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
CDKL3Q8IVW4 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC16.81■□□□□ 0.28
CDKL3Q8IVW4 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC16.81■□□□□ 0.28
CDKL3Q8IVW4 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDKL3Q8IVW4 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDKL3Q8IVW4 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDKL3Q8IVW4 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CDKL3Q8IVW4 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CDKL3Q8IVW4 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC16.8■□□□□ 0.28
CDKL3Q8IVW4 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDKL3Q8IVW4 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CDKL3Q8IVW4 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
CDKL3Q8IVW4 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
CDKL3Q8IVW4 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDKL3Q8IVW4 RELA-227ENST00000615805 2236 ntTSL 5 BASIC16.8■□□□□ 0.28
CDKL3Q8IVW4 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC16.8■□□□□ 0.28
CDKL3Q8IVW4 IL9RP2-201ENST00000423948 1312 ntBASIC16.8■□□□□ 0.28
CDKL3Q8IVW4 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC16.8■□□□□ 0.28
CDKL3Q8IVW4 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
CDKL3Q8IVW4 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDKL3Q8IVW4 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC16.8■□□□□ 0.28
CDKL3Q8IVW4 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
CDKL3Q8IVW4 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC16.8■□□□□ 0.28
CDKL3Q8IVW4 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC16.8■□□□□ 0.28
CDKL3Q8IVW4 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC16.8■□□□□ 0.28
CDKL3Q8IVW4 HS6ST1P1-201ENST00000481504 1234 ntBASIC16.8■□□□□ 0.28
CDKL3Q8IVW4 SMN2-210ENST00000511812 867 ntTSL 2 BASIC16.8■□□□□ 0.28
CDKL3Q8IVW4 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC16.8■□□□□ 0.28
CDKL3Q8IVW4 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC16.8■□□□□ 0.28
CDKL3Q8IVW4 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC16.8■□□□□ 0.28
CDKL3Q8IVW4 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC16.8■□□□□ 0.28
CDKL3Q8IVW4 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
CDKL3Q8IVW4 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
CDKL3Q8IVW4 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDKL3Q8IVW4 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDKL3Q8IVW4 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDKL3Q8IVW4 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC16.8■□□□□ 0.28
CDKL3Q8IVW4 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDKL3Q8IVW4 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC16.8■□□□□ 0.28
CDKL3Q8IVW4 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDKL3Q8IVW4 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC16.8■□□□□ 0.28
CDKL3Q8IVW4 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
CDKL3Q8IVW4 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDKL3Q8IVW4 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CDKL3Q8IVW4 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC16.8■□□□□ 0.28
CDKL3Q8IVW4 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CDKL3Q8IVW4 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
CDKL3Q8IVW4 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
CDKL3Q8IVW4 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CDKL3Q8IVW4 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
CDKL3Q8IVW4 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CDKL3Q8IVW4 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC16.79■□□□□ 0.28
CDKL3Q8IVW4 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
CDKL3Q8IVW4 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CDKL3Q8IVW4 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CDKL3Q8IVW4 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC16.79■□□□□ 0.28
CDKL3Q8IVW4 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CDKL3Q8IVW4 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC16.79■□□□□ 0.28
CDKL3Q8IVW4 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CDKL3Q8IVW4 LBH-204ENST00000406087 559 ntTSL 4 BASIC16.79■□□□□ 0.28
CDKL3Q8IVW4 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC16.79■□□□□ 0.28
CDKL3Q8IVW4 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC16.79■□□□□ 0.28
CDKL3Q8IVW4 KRT18P2-201ENST00000447938 1258 ntBASIC16.79■□□□□ 0.28
CDKL3Q8IVW4 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CDKL3Q8IVW4 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CDKL3Q8IVW4 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
CDKL3Q8IVW4 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CDKL3Q8IVW4 RPL18-209ENST00000550645 463 ntTSL 5 BASIC16.79■□□□□ 0.28
CDKL3Q8IVW4 RPL18-214ENST00000552588 559 ntTSL 3 BASIC16.79■□□□□ 0.28
CDKL3Q8IVW4 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
CDKL3Q8IVW4 AC068137.2-201ENST00000605408 478 ntBASIC16.79■□□□□ 0.28
CDKL3Q8IVW4 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
CDKL3Q8IVW4 AL161645.1-201ENST00000622716 1255 ntBASIC16.79■□□□□ 0.28
CDKL3Q8IVW4 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC16.79■□□□□ 0.28
CDKL3Q8IVW4 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CDKL3Q8IVW4 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CDKL3Q8IVW4 AC112504.1-201ENST00000623415 1841 ntBASIC16.79■□□□□ 0.28
CDKL3Q8IVW4 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms