Protein–RNA interactions for Protein: Q8IUI8

CRLF3, Cytokine receptor-like factor 3, humanhuman

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3Q8IUI8 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC16.42■□□□□ 0.22
CRLF3Q8IUI8 AL773604.1-201ENST00000617417 272 ntBASIC16.42■□□□□ 0.22
CRLF3Q8IUI8 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CRLF3Q8IUI8 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC16.42■□□□□ 0.22
CRLF3Q8IUI8 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CRLF3Q8IUI8 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CRLF3Q8IUI8 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CRLF3Q8IUI8 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CRLF3Q8IUI8 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CRLF3Q8IUI8 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CRLF3Q8IUI8 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC16.42■□□□□ 0.22
CRLF3Q8IUI8 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CRLF3Q8IUI8 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC16.42■□□□□ 0.22
CRLF3Q8IUI8 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC16.41■□□□□ 0.22
CRLF3Q8IUI8 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CRLF3Q8IUI8 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CRLF3Q8IUI8 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
CRLF3Q8IUI8 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CRLF3Q8IUI8 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC16.41■□□□□ 0.22
CRLF3Q8IUI8 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
CRLF3Q8IUI8 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CRLF3Q8IUI8 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CRLF3Q8IUI8 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC16.41■□□□□ 0.22
CRLF3Q8IUI8 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC16.41■□□□□ 0.22
CRLF3Q8IUI8 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC16.41■□□□□ 0.22
CRLF3Q8IUI8 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CRLF3Q8IUI8 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC16.41■□□□□ 0.22
CRLF3Q8IUI8 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CRLF3Q8IUI8 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC16.41■□□□□ 0.22
CRLF3Q8IUI8 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CRLF3Q8IUI8 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CRLF3Q8IUI8 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CRLF3Q8IUI8 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC16.41■□□□□ 0.22
CRLF3Q8IUI8 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CRLF3Q8IUI8 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC16.41■□□□□ 0.22
CRLF3Q8IUI8 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC16.41■□□□□ 0.22
CRLF3Q8IUI8 SPDYE21P-201ENST00000413323 827 ntBASIC16.41■□□□□ 0.22
CRLF3Q8IUI8 AP000347.1-202ENST00000435868 847 ntBASIC16.41■□□□□ 0.22
CRLF3Q8IUI8 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC16.41■□□□□ 0.22
CRLF3Q8IUI8 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC16.41■□□□□ 0.22
CRLF3Q8IUI8 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC16.41■□□□□ 0.22
CRLF3Q8IUI8 COX5A-202ENST00000562233 441 ntTSL 3 BASIC16.41■□□□□ 0.22
CRLF3Q8IUI8 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC16.41■□□□□ 0.22
CRLF3Q8IUI8 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
CRLF3Q8IUI8 AP001005.1-201ENST00000571755 1248 ntBASIC16.41■□□□□ 0.22
CRLF3Q8IUI8 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CRLF3Q8IUI8 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC16.41■□□□□ 0.22
CRLF3Q8IUI8 AC148477.8-201ENST00000624298 468 ntBASIC16.41■□□□□ 0.22
CRLF3Q8IUI8 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
CRLF3Q8IUI8 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
CRLF3Q8IUI8 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC16.41■□□□□ 0.22
CRLF3Q8IUI8 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CRLF3Q8IUI8 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CRLF3Q8IUI8 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
CRLF3Q8IUI8 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC16.41■□□□□ 0.22
CRLF3Q8IUI8 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC16.41■□□□□ 0.22
CRLF3Q8IUI8 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CRLF3Q8IUI8 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
CRLF3Q8IUI8 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
CRLF3Q8IUI8 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CRLF3Q8IUI8 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC16.41■□□□□ 0.22
CRLF3Q8IUI8 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
CRLF3Q8IUI8 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CRLF3Q8IUI8 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CRLF3Q8IUI8 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC16.4■□□□□ 0.22
CRLF3Q8IUI8 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
CRLF3Q8IUI8 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC16.4■□□□□ 0.22
CRLF3Q8IUI8 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CRLF3Q8IUI8 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
CRLF3Q8IUI8 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CRLF3Q8IUI8 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CRLF3Q8IUI8 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC16.4■□□□□ 0.22
CRLF3Q8IUI8 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC16.4■□□□□ 0.22
CRLF3Q8IUI8 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CRLF3Q8IUI8 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CRLF3Q8IUI8 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC16.4■□□□□ 0.22
CRLF3Q8IUI8 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC16.4■□□□□ 0.22
CRLF3Q8IUI8 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC16.4■□□□□ 0.22
CRLF3Q8IUI8 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CRLF3Q8IUI8 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CRLF3Q8IUI8 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CRLF3Q8IUI8 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC16.4■□□□□ 0.22
CRLF3Q8IUI8 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CRLF3Q8IUI8 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC16.4■□□□□ 0.22
CRLF3Q8IUI8 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC16.4■□□□□ 0.22
CRLF3Q8IUI8 SCARNA2-201ENST00000458748 420 ntBASIC16.4■□□□□ 0.22
CRLF3Q8IUI8 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC16.4■□□□□ 0.22
CRLF3Q8IUI8 POU5F1P6-201ENST00000466990 990 ntBASIC16.4■□□□□ 0.22
CRLF3Q8IUI8 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC16.4■□□□□ 0.22
CRLF3Q8IUI8 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC16.4■□□□□ 0.22
CRLF3Q8IUI8 AC073648.2-201ENST00000510116 352 ntBASIC16.4■□□□□ 0.22
CRLF3Q8IUI8 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC16.4■□□□□ 0.22
CRLF3Q8IUI8 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC16.4■□□□□ 0.22
CRLF3Q8IUI8 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CRLF3Q8IUI8 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC16.4■□□□□ 0.22
CRLF3Q8IUI8 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CRLF3Q8IUI8 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CRLF3Q8IUI8 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CRLF3Q8IUI8 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CRLF3Q8IUI8 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms