Protein–RNA interactions for Protein: Q7Z7G8

VPS13B, Vacuolar protein sorting-associated protein 13B, humanhuman

Predictions only

Length 4,022 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13BQ7Z7G8 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC9.91□□□□□ -0.82
VPS13BQ7Z7G8 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC9.91□□□□□ -0.82
VPS13BQ7Z7G8 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
VPS13BQ7Z7G8 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC9.91□□□□□ -0.82
VPS13BQ7Z7G8 PCGF3-213ENST00000620529 1899 ntBASIC9.91□□□□□ -0.82
VPS13BQ7Z7G8 AC005915.1-201ENST00000624912 2018 ntBASIC9.91□□□□□ -0.82
VPS13BQ7Z7G8 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC9.91□□□□□ -0.82
VPS13BQ7Z7G8 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC9.91□□□□□ -0.82
VPS13BQ7Z7G8 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
VPS13BQ7Z7G8 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC9.91□□□□□ -0.82
VPS13BQ7Z7G8 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC9.91□□□□□ -0.82
VPS13BQ7Z7G8 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
VPS13BQ7Z7G8 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC9.91□□□□□ -0.82
VPS13BQ7Z7G8 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
VPS13BQ7Z7G8 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
VPS13BQ7Z7G8 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC9.91□□□□□ -0.82
VPS13BQ7Z7G8 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
VPS13BQ7Z7G8 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC9.91□□□□□ -0.82
VPS13BQ7Z7G8 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
VPS13BQ7Z7G8 AL118558.3-201ENST00000607414 1079 ntBASIC9.91□□□□□ -0.82
VPS13BQ7Z7G8 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC9.91□□□□□ -0.82
VPS13BQ7Z7G8 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
VPS13BQ7Z7G8 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
VPS13BQ7Z7G8 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC9.9□□□□□ -0.82
VPS13BQ7Z7G8 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC9.9□□□□□ -0.82
VPS13BQ7Z7G8 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
VPS13BQ7Z7G8 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
VPS13BQ7Z7G8 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC9.9□□□□□ -0.82
VPS13BQ7Z7G8 AC018892.3-201ENST00000623986 2499 ntBASIC9.9□□□□□ -0.82
VPS13BQ7Z7G8 AL592424.1-201ENST00000563624 1536 ntBASIC9.9□□□□□ -0.82
VPS13BQ7Z7G8 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
VPS13BQ7Z7G8 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC9.9□□□□□ -0.82
VPS13BQ7Z7G8 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC9.9□□□□□ -0.82
VPS13BQ7Z7G8 UFM1-202ENST00000379649 846 ntTSL 4 BASIC9.9□□□□□ -0.82
VPS13BQ7Z7G8 AC060234.1-201ENST00000422966 474 ntTSL 3 BASIC9.9□□□□□ -0.82
VPS13BQ7Z7G8 TARDBPP1-201ENST00000442013 1203 ntBASIC9.9□□□□□ -0.82
VPS13BQ7Z7G8 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC9.9□□□□□ -0.82
VPS13BQ7Z7G8 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC9.9□□□□□ -0.82
VPS13BQ7Z7G8 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC9.9□□□□□ -0.82
VPS13BQ7Z7G8 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC9.9□□□□□ -0.82
VPS13BQ7Z7G8 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC9.9□□□□□ -0.82
VPS13BQ7Z7G8 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
VPS13BQ7Z7G8 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
VPS13BQ7Z7G8 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC9.9□□□□□ -0.82
VPS13BQ7Z7G8 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC9.9□□□□□ -0.82
VPS13BQ7Z7G8 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC9.9□□□□□ -0.82
VPS13BQ7Z7G8 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
VPS13BQ7Z7G8 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
VPS13BQ7Z7G8 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
VPS13BQ7Z7G8 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
VPS13BQ7Z7G8 NF2-208ENST00000403435 2568 ntTSL 5 BASIC9.9□□□□□ -0.82
VPS13BQ7Z7G8 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
VPS13BQ7Z7G8 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
VPS13BQ7Z7G8 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
VPS13BQ7Z7G8 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
VPS13BQ7Z7G8 HIST2H2BC-201ENST00000498492 580 ntBASIC9.9□□□□□ -0.82
VPS13BQ7Z7G8 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC9.9□□□□□ -0.82
VPS13BQ7Z7G8 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC9.9□□□□□ -0.82
VPS13BQ7Z7G8 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC9.9□□□□□ -0.82
VPS13BQ7Z7G8 MIR4321-201ENST00000592276 80 ntBASIC9.9□□□□□ -0.82
VPS13BQ7Z7G8 ATF5-205ENST00000600336 682 ntTSL 2 BASIC9.9□□□□□ -0.82
VPS13BQ7Z7G8 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
VPS13BQ7Z7G8 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
VPS13BQ7Z7G8 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC9.9□□□□□ -0.82
VPS13BQ7Z7G8 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
VPS13BQ7Z7G8 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC9.9□□□□□ -0.82
VPS13BQ7Z7G8 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC9.9□□□□□ -0.82
VPS13BQ7Z7G8 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC9.9□□□□□ -0.83
VPS13BQ7Z7G8 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC9.9□□□□□ -0.83
VPS13BQ7Z7G8 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
VPS13BQ7Z7G8 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC9.9□□□□□ -0.83
VPS13BQ7Z7G8 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC9.9□□□□□ -0.83
VPS13BQ7Z7G8 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC9.9□□□□□ -0.83
VPS13BQ7Z7G8 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC9.9□□□□□ -0.83
VPS13BQ7Z7G8 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
VPS13BQ7Z7G8 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC9.9□□□□□ -0.83
VPS13BQ7Z7G8 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC9.9□□□□□ -0.83
VPS13BQ7Z7G8 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC9.9□□□□□ -0.83
VPS13BQ7Z7G8 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC9.9□□□□□ -0.83
VPS13BQ7Z7G8 AC036164.1-201ENST00000570544 333 ntBASIC9.9□□□□□ -0.83
VPS13BQ7Z7G8 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC9.9□□□□□ -0.83
VPS13BQ7Z7G8 AC015967.2-201ENST00000624092 234 ntBASIC9.9□□□□□ -0.83
VPS13BQ7Z7G8 AC006435.4-201ENST00000625037 234 ntBASIC9.9□□□□□ -0.83
VPS13BQ7Z7G8 AL356737.1-201ENST00000634391 234 ntBASIC9.9□□□□□ -0.83
VPS13BQ7Z7G8 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC9.9□□□□□ -0.83
VPS13BQ7Z7G8 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC9.9□□□□□ -0.83
VPS13BQ7Z7G8 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
VPS13BQ7Z7G8 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
VPS13BQ7Z7G8 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC9.9□□□□□ -0.83
VPS13BQ7Z7G8 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
VPS13BQ7Z7G8 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC9.89□□□□□ -0.83
VPS13BQ7Z7G8 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC9.89□□□□□ -0.83
VPS13BQ7Z7G8 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC9.89□□□□□ -0.83
VPS13BQ7Z7G8 TP73-213ENST00000604479 1623 ntTSL 5 BASIC9.89□□□□□ -0.83
VPS13BQ7Z7G8 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
VPS13BQ7Z7G8 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
VPS13BQ7Z7G8 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
VPS13BQ7Z7G8 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
VPS13BQ7Z7G8 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC9.89□□□□□ -0.83
VPS13BQ7Z7G8 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC9.89□□□□□ -0.83
Retrieved 100 of 98,524 protein–RNA pairs in 54 ms