Protein–RNA interactions for Protein: Q6ZSB3

LINC00299, Putative uncharacterized protein encoded by LINC00299, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00299Q6ZSB3 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
LINC00299Q6ZSB3 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LINC00299Q6ZSB3 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
LINC00299Q6ZSB3 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC14.32□□□□□ -0.12
LINC00299Q6ZSB3 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
LINC00299Q6ZSB3 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
LINC00299Q6ZSB3 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC14.32□□□□□ -0.12
LINC00299Q6ZSB3 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC14.32□□□□□ -0.12
LINC00299Q6ZSB3 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC14.32□□□□□ -0.12
LINC00299Q6ZSB3 AC098934.4-201ENST00000564127 592 ntBASIC14.32□□□□□ -0.12
LINC00299Q6ZSB3 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
LINC00299Q6ZSB3 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
LINC00299Q6ZSB3 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LINC00299Q6ZSB3 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC14.32□□□□□ -0.12
LINC00299Q6ZSB3 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LINC00299Q6ZSB3 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
LINC00299Q6ZSB3 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
LINC00299Q6ZSB3 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC14.32□□□□□ -0.12
LINC00299Q6ZSB3 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
LINC00299Q6ZSB3 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
LINC00299Q6ZSB3 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LINC00299Q6ZSB3 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
LINC00299Q6ZSB3 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LINC00299Q6ZSB3 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC14.32□□□□□ -0.12
LINC00299Q6ZSB3 USP31-203ENST00000567975 2142 ntTSL 2 BASIC14.32□□□□□ -0.12
LINC00299Q6ZSB3 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
LINC00299Q6ZSB3 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC14.32□□□□□ -0.12
LINC00299Q6ZSB3 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC14.32□□□□□ -0.12
LINC00299Q6ZSB3 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LINC00299Q6ZSB3 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
LINC00299Q6ZSB3 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC14.31□□□□□ -0.12
LINC00299Q6ZSB3 AL353732.1-201ENST00000569618 1459 ntBASIC14.31□□□□□ -0.12
LINC00299Q6ZSB3 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
LINC00299Q6ZSB3 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
LINC00299Q6ZSB3 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
LINC00299Q6ZSB3 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LINC00299Q6ZSB3 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC14.31□□□□□ -0.12
LINC00299Q6ZSB3 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
LINC00299Q6ZSB3 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC14.31□□□□□ -0.12
LINC00299Q6ZSB3 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LINC00299Q6ZSB3 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LINC00299Q6ZSB3 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LINC00299Q6ZSB3 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC14.31□□□□□ -0.12
LINC00299Q6ZSB3 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
LINC00299Q6ZSB3 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
LINC00299Q6ZSB3 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC14.31□□□□□ -0.12
LINC00299Q6ZSB3 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC14.31□□□□□ -0.12
LINC00299Q6ZSB3 FAM220CP-201ENST00000395253 831 ntBASIC14.31□□□□□ -0.12
LINC00299Q6ZSB3 FAM197Y1-201ENST00000421178 764 ntBASIC14.31□□□□□ -0.12
LINC00299Q6ZSB3 AC009947.2-201ENST00000444014 672 ntBASIC14.31□□□□□ -0.12
LINC00299Q6ZSB3 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC14.31□□□□□ -0.12
LINC00299Q6ZSB3 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC14.31□□□□□ -0.12
LINC00299Q6ZSB3 NT5C-210ENST00000582160 860 ntTSL 2 BASIC14.31□□□□□ -0.12
LINC00299Q6ZSB3 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC14.31□□□□□ -0.12
LINC00299Q6ZSB3 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC14.31□□□□□ -0.12
LINC00299Q6ZSB3 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
LINC00299Q6ZSB3 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LINC00299Q6ZSB3 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC14.31□□□□□ -0.12
LINC00299Q6ZSB3 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC14.31□□□□□ -0.12
LINC00299Q6ZSB3 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
LINC00299Q6ZSB3 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
LINC00299Q6ZSB3 AL353692.3-201ENST00000407031 1396 ntBASIC14.31□□□□□ -0.12
LINC00299Q6ZSB3 IGHG3-202ENST00000641136 2751 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
LINC00299Q6ZSB3 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC14.31□□□□□ -0.12
LINC00299Q6ZSB3 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
LINC00299Q6ZSB3 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LINC00299Q6ZSB3 LINC00887-202ENST00000414120 2880 ntTSL 3 BASIC14.31□□□□□ -0.12
LINC00299Q6ZSB3 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
LINC00299Q6ZSB3 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
LINC00299Q6ZSB3 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LINC00299Q6ZSB3 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LINC00299Q6ZSB3 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC14.31□□□□□ -0.12
LINC00299Q6ZSB3 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LINC00299Q6ZSB3 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
LINC00299Q6ZSB3 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LINC00299Q6ZSB3 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC14.3□□□□□ -0.12
LINC00299Q6ZSB3 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
LINC00299Q6ZSB3 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
LINC00299Q6ZSB3 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LINC00299Q6ZSB3 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC14.3□□□□□ -0.12
LINC00299Q6ZSB3 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
LINC00299Q6ZSB3 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
LINC00299Q6ZSB3 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
LINC00299Q6ZSB3 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LINC00299Q6ZSB3 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
LINC00299Q6ZSB3 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
LINC00299Q6ZSB3 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
LINC00299Q6ZSB3 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC14.3□□□□□ -0.12
LINC00299Q6ZSB3 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
LINC00299Q6ZSB3 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LINC00299Q6ZSB3 Telomerase-vert.1-201ENST00000363312 438 ntBASIC14.3□□□□□ -0.12
LINC00299Q6ZSB3 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC14.3□□□□□ -0.12
LINC00299Q6ZSB3 IGHGP-201ENST00000390555 1178 ntBASIC14.3□□□□□ -0.12
LINC00299Q6ZSB3 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC14.3□□□□□ -0.12
LINC00299Q6ZSB3 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
LINC00299Q6ZSB3 HLA-F-220ENST00000434407 884 ntBASIC14.3□□□□□ -0.12
LINC00299Q6ZSB3 NCF1B-203ENST00000435988 1254 ntBASIC14.3□□□□□ -0.12
LINC00299Q6ZSB3 AC069152.1-201ENST00000438030 544 ntBASIC14.3□□□□□ -0.12
LINC00299Q6ZSB3 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC14.3□□□□□ -0.12
LINC00299Q6ZSB3 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms