Protein–RNA interactions for Protein: Q6S5L8

SHC4, SHC-transforming protein 4, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC4Q6S5L8 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
SHC4Q6S5L8 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC18.41■□□□□ 0.54
SHC4Q6S5L8 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SHC4Q6S5L8 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC18.41■□□□□ 0.54
SHC4Q6S5L8 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC18.41■□□□□ 0.54
SHC4Q6S5L8 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC18.41■□□□□ 0.54
SHC4Q6S5L8 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
SHC4Q6S5L8 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SHC4Q6S5L8 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
SHC4Q6S5L8 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
SHC4Q6S5L8 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
SHC4Q6S5L8 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SHC4Q6S5L8 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
SHC4Q6S5L8 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC18.4■□□□□ 0.54
SHC4Q6S5L8 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
SHC4Q6S5L8 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SHC4Q6S5L8 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SHC4Q6S5L8 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SHC4Q6S5L8 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SHC4Q6S5L8 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SHC4Q6S5L8 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SHC4Q6S5L8 HAUS4P1-201ENST00000406739 1145 ntBASIC18.4■□□□□ 0.54
SHC4Q6S5L8 AL590627.1-203ENST00000421194 1026 ntBASIC18.4■□□□□ 0.54
SHC4Q6S5L8 AC074386.1-202ENST00000463561 864 ntBASIC18.4■□□□□ 0.54
SHC4Q6S5L8 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC18.4■□□□□ 0.54
SHC4Q6S5L8 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC18.4■□□□□ 0.54
SHC4Q6S5L8 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC18.4■□□□□ 0.54
SHC4Q6S5L8 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
SHC4Q6S5L8 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC18.4■□□□□ 0.54
SHC4Q6S5L8 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC18.4■□□□□ 0.54
SHC4Q6S5L8 KLK8-205ENST00000593490 267 ntTSL 3 BASIC18.4■□□□□ 0.54
SHC4Q6S5L8 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC18.4■□□□□ 0.54
SHC4Q6S5L8 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
SHC4Q6S5L8 AC068137.2-201ENST00000605408 478 ntBASIC18.4■□□□□ 0.54
SHC4Q6S5L8 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
SHC4Q6S5L8 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SHC4Q6S5L8 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
SHC4Q6S5L8 REM2-202ENST00000536884 1331 ntTSL 2 BASIC18.4■□□□□ 0.54
SHC4Q6S5L8 NARF-206ENST00000457415 1668 ntTSL 5 BASIC18.4■□□□□ 0.54
SHC4Q6S5L8 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SHC4Q6S5L8 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
SHC4Q6S5L8 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
SHC4Q6S5L8 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
SHC4Q6S5L8 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
SHC4Q6S5L8 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC18.4■□□□□ 0.54
SHC4Q6S5L8 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC18.4■□□□□ 0.54
SHC4Q6S5L8 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC18.4■□□□□ 0.54
SHC4Q6S5L8 AC104640.1-201ENST00000562617 2109 ntBASIC18.4■□□□□ 0.54
SHC4Q6S5L8 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC18.4■□□□□ 0.54
SHC4Q6S5L8 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
SHC4Q6S5L8 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SHC4Q6S5L8 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
SHC4Q6S5L8 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC18.39■□□□□ 0.54
SHC4Q6S5L8 AC126177.1-201ENST00000547829 2218 ntBASIC18.39■□□□□ 0.54
SHC4Q6S5L8 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.54
SHC4Q6S5L8 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.54
SHC4Q6S5L8 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SHC4Q6S5L8 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SHC4Q6S5L8 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SHC4Q6S5L8 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC18.39■□□□□ 0.53
SHC4Q6S5L8 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SHC4Q6S5L8 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SHC4Q6S5L8 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SHC4Q6S5L8 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
SHC4Q6S5L8 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
SHC4Q6S5L8 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC18.39■□□□□ 0.53
SHC4Q6S5L8 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC18.39■□□□□ 0.53
SHC4Q6S5L8 SMN2-210ENST00000511812 867 ntTSL 2 BASIC18.39■□□□□ 0.53
SHC4Q6S5L8 AL138918.1-201ENST00000568306 659 ntBASIC18.39■□□□□ 0.53
SHC4Q6S5L8 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC18.39■□□□□ 0.53
SHC4Q6S5L8 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SHC4Q6S5L8 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
SHC4Q6S5L8 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SHC4Q6S5L8 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
SHC4Q6S5L8 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SHC4Q6S5L8 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
SHC4Q6S5L8 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SHC4Q6S5L8 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC18.39■□□□□ 0.53
SHC4Q6S5L8 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC18.39■□□□□ 0.53
SHC4Q6S5L8 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SHC4Q6S5L8 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
SHC4Q6S5L8 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC18.39■□□□□ 0.53
SHC4Q6S5L8 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SHC4Q6S5L8 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SHC4Q6S5L8 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC18.38■□□□□ 0.53
SHC4Q6S5L8 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
SHC4Q6S5L8 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC18.38■□□□□ 0.53
SHC4Q6S5L8 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC18.38■□□□□ 0.53
SHC4Q6S5L8 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SHC4Q6S5L8 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SHC4Q6S5L8 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SHC4Q6S5L8 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SHC4Q6S5L8 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
SHC4Q6S5L8 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SHC4Q6S5L8 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC18.38■□□□□ 0.53
SHC4Q6S5L8 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SHC4Q6S5L8 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC18.38■□□□□ 0.53
SHC4Q6S5L8 PRYP6-201ENST00000514804 343 ntBASIC18.38■□□□□ 0.53
SHC4Q6S5L8 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC18.38■□□□□ 0.53
SHC4Q6S5L8 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 73.8 ms