Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 AC093525.9-201ENST00000624961 1746 ntBASIC15.1■□□□□ 0.01
TMEM53Q6P2H8 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
TMEM53Q6P2H8 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TMEM53Q6P2H8 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TMEM53Q6P2H8 RAB17-203ENST00000409576 466 ntTSL 3 BASIC15.1■□□□□ 0.01
TMEM53Q6P2H8 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC15.1■□□□□ 0.01
TMEM53Q6P2H8 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC15.1■□□□□ 0.01
TMEM53Q6P2H8 AC139887.3-201ENST00000568585 713 ntBASIC15.1■□□□□ 0.01
TMEM53Q6P2H8 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC15.1■□□□□ 0.01
TMEM53Q6P2H8 AL589182.2-201ENST00000619332 1049 ntBASIC15.1■□□□□ 0.01
TMEM53Q6P2H8 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC15.1■□□□□ 0.01
TMEM53Q6P2H8 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
TMEM53Q6P2H8 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC15.1■□□□□ 0.01
TMEM53Q6P2H8 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TMEM53Q6P2H8 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
TMEM53Q6P2H8 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TMEM53Q6P2H8 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
TMEM53Q6P2H8 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TMEM53Q6P2H8 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC15.1■□□□□ 0.01
TMEM53Q6P2H8 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TMEM53Q6P2H8 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC15.1■□□□□ 0.01
TMEM53Q6P2H8 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
TMEM53Q6P2H8 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
TMEM53Q6P2H8 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TMEM53Q6P2H8 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
TMEM53Q6P2H8 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
TMEM53Q6P2H8 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TMEM53Q6P2H8 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TMEM53Q6P2H8 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
TMEM53Q6P2H8 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TMEM53Q6P2H8 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC15.09■□□□□ 0.01
TMEM53Q6P2H8 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC15.09■□□□□ 0.01
TMEM53Q6P2H8 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
TMEM53Q6P2H8 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TMEM53Q6P2H8 AC116353.5-201ENST00000638148 1699 ntBASIC15.09■□□□□ 0.01
TMEM53Q6P2H8 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC15.09■□□□□ 0.01
TMEM53Q6P2H8 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC15.09■□□□□ 0.01
TMEM53Q6P2H8 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TMEM53Q6P2H8 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC15.09■□□□□ 0.01
TMEM53Q6P2H8 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC15.09■□□□□ 0.01
TMEM53Q6P2H8 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
TMEM53Q6P2H8 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TMEM53Q6P2H8 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TMEM53Q6P2H8 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TMEM53Q6P2H8 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TMEM53Q6P2H8 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC15.09■□□□□ 0.01
TMEM53Q6P2H8 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC15.09■□□□□ 0.01
TMEM53Q6P2H8 LINC00982-205ENST00000420957 435 ntBASIC15.09■□□□□ 0.01
TMEM53Q6P2H8 AF186996.4-201ENST00000467186 377 ntBASIC15.09■□□□□ 0.01
TMEM53Q6P2H8 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC15.09■□□□□ 0.01
TMEM53Q6P2H8 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC15.09■□□□□ 0.01
TMEM53Q6P2H8 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC15.09■□□□□ 0.01
TMEM53Q6P2H8 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC15.09■□□□□ 0.01
TMEM53Q6P2H8 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TMEM53Q6P2H8 RNF151-202ENST00000569210 853 ntTSL 2 BASIC15.09■□□□□ 0.01
TMEM53Q6P2H8 AC064862.7-201ENST00000604520 867 ntBASIC15.09■□□□□ 0.01
TMEM53Q6P2H8 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC15.09■□□□□ 0.01
TMEM53Q6P2H8 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC15.09■□□□□ 0.01
TMEM53Q6P2H8 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TMEM53Q6P2H8 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC15.09■□□□□ 0.01
TMEM53Q6P2H8 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC15.09■□□□□ 0.01
TMEM53Q6P2H8 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
TMEM53Q6P2H8 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC15.09■□□□□ 0.01
TMEM53Q6P2H8 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
TMEM53Q6P2H8 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TMEM53Q6P2H8 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TMEM53Q6P2H8 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TMEM53Q6P2H8 PANX2-202ENST00000395842 3051 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
TMEM53Q6P2H8 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC15.09■□□□□ 0.01
TMEM53Q6P2H8 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
TMEM53Q6P2H8 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TMEM53Q6P2H8 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
TMEM53Q6P2H8 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC15.09■□□□□ 0.01
TMEM53Q6P2H8 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC15.09■□□□□ 0.01
TMEM53Q6P2H8 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC15.08■□□□□ 0.01
TMEM53Q6P2H8 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
TMEM53Q6P2H8 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
TMEM53Q6P2H8 AC004817.3-201ENST00000602957 2129 ntBASIC15.08■□□□□ 0.01
TMEM53Q6P2H8 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC15.08■□□□□ 0.01
TMEM53Q6P2H8 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
TMEM53Q6P2H8 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC15.08■□□□□ 0.01
TMEM53Q6P2H8 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
TMEM53Q6P2H8 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC15.08■□□□□ 0
TMEM53Q6P2H8 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC15.08■□□□□ 0
TMEM53Q6P2H8 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
TMEM53Q6P2H8 SLC27A4-201ENST00000300456 3028 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TMEM53Q6P2H8 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC15.08■□□□□ 0
TMEM53Q6P2H8 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TMEM53Q6P2H8 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC15.08■□□□□ 0
TMEM53Q6P2H8 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC15.08■□□□□ 0
TMEM53Q6P2H8 FAM197Y8-203ENST00000450145 560 ntBASIC15.08■□□□□ 0
TMEM53Q6P2H8 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
TMEM53Q6P2H8 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC15.08■□□□□ 0
TMEM53Q6P2H8 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC15.08■□□□□ 0
TMEM53Q6P2H8 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC15.08■□□□□ 0
TMEM53Q6P2H8 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC15.08■□□□□ 0
TMEM53Q6P2H8 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
TMEM53Q6P2H8 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TMEM53Q6P2H8 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
TMEM53Q6P2H8 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 67.8 ms