Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
LRRK2Q5S007 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC13.95□□□□□ -0.18
LRRK2Q5S007 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC13.95□□□□□ -0.18
LRRK2Q5S007 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC13.95□□□□□ -0.18
LRRK2Q5S007 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
LRRK2Q5S007 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
LRRK2Q5S007 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LRRK2Q5S007 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LRRK2Q5S007 AC133963.1-201ENST00000504166 1679 ntBASIC13.94□□□□□ -0.18
LRRK2Q5S007 AC026904.3-201ENST00000636550 1530 ntTSL 5 BASIC13.94□□□□□ -0.18
LRRK2Q5S007 RELA-227ENST00000615805 2236 ntTSL 5 BASIC13.94□□□□□ -0.18
LRRK2Q5S007 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LRRK2Q5S007 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
LRRK2Q5S007 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
LRRK2Q5S007 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC13.94□□□□□ -0.18
LRRK2Q5S007 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC13.94□□□□□ -0.18
LRRK2Q5S007 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
LRRK2Q5S007 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
LRRK2Q5S007 TCL1B-201ENST00000340722 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LRRK2Q5S007 COL5A1-AS1-201ENST00000371813 336 ntTSL 2 BASIC13.94□□□□□ -0.18
LRRK2Q5S007 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC13.94□□□□□ -0.18
LRRK2Q5S007 AK1-202ENST00000373156 757 ntAPPRIS P1 TSL 3 BASIC13.94□□□□□ -0.18
LRRK2Q5S007 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
LRRK2Q5S007 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC13.94□□□□□ -0.18
LRRK2Q5S007 AC073094.1-201ENST00000453798 433 ntTSL 2 BASIC13.94□□□□□ -0.18
LRRK2Q5S007 IMP3P2-201ENST00000489760 475 ntBASIC13.94□□□□□ -0.18
LRRK2Q5S007 NUP210P1-202ENST00000504322 710 ntBASIC13.94□□□□□ -0.18
LRRK2Q5S007 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
LRRK2Q5S007 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC13.94□□□□□ -0.18
LRRK2Q5S007 AP000346.4-201ENST00000614827 381 ntBASIC13.94□□□□□ -0.18
LRRK2Q5S007 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LRRK2Q5S007 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
LRRK2Q5S007 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
LRRK2Q5S007 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LRRK2Q5S007 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC13.94□□□□□ -0.18
LRRK2Q5S007 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
LRRK2Q5S007 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
LRRK2Q5S007 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LRRK2Q5S007 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LRRK2Q5S007 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC13.94□□□□□ -0.18
LRRK2Q5S007 IGLJ3-201ENST00000390324 176 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
LRRK2Q5S007 EEF1DP6-201ENST00000449232 372 ntBASIC13.94□□□□□ -0.18
LRRK2Q5S007 RN7SL181P-201ENST00000462921 277 ntBASIC13.94□□□□□ -0.18
LRRK2Q5S007 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
LRRK2Q5S007 AC132192.2-201ENST00000596206 1147 ntBASIC13.94□□□□□ -0.18
LRRK2Q5S007 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LRRK2Q5S007 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
LRRK2Q5S007 AC093525.9-201ENST00000624961 1746 ntBASIC13.94□□□□□ -0.18
LRRK2Q5S007 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
LRRK2Q5S007 CYP4F24P-201ENST00000586049 1580 ntBASIC13.94□□□□□ -0.18
LRRK2Q5S007 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LRRK2Q5S007 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC13.93□□□□□ -0.18
LRRK2Q5S007 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LRRK2Q5S007 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
LRRK2Q5S007 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LRRK2Q5S007 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LRRK2Q5S007 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
LRRK2Q5S007 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC13.93□□□□□ -0.18
LRRK2Q5S007 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
LRRK2Q5S007 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LRRK2Q5S007 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
LRRK2Q5S007 SFT2D2-202ENST00000367829 491 ntTSL 5 BASIC13.93□□□□□ -0.18
LRRK2Q5S007 SLC25A1P3-201ENST00000395415 828 ntBASIC13.93□□□□□ -0.18
LRRK2Q5S007 TISP43-201ENST00000409793 538 ntTSL 4 BASIC13.93□□□□□ -0.18
LRRK2Q5S007 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC13.93□□□□□ -0.18
LRRK2Q5S007 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LRRK2Q5S007 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC13.93□□□□□ -0.18
LRRK2Q5S007 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LRRK2Q5S007 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LRRK2Q5S007 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
LRRK2Q5S007 RERG-209ENST00000546331 1383 ntTSL 2 BASIC13.93□□□□□ -0.18
LRRK2Q5S007 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
LRRK2Q5S007 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LRRK2Q5S007 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LRRK2Q5S007 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
LRRK2Q5S007 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LRRK2Q5S007 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC13.93□□□□□ -0.18
LRRK2Q5S007 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
LRRK2Q5S007 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
LRRK2Q5S007 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
LRRK2Q5S007 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
LRRK2Q5S007 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
LRRK2Q5S007 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
LRRK2Q5S007 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
LRRK2Q5S007 MSRA-203ENST00000441698 788 ntTSL 2 BASIC13.93□□□□□ -0.18
LRRK2Q5S007 RN7SL818P-201ENST00000485099 259 ntBASIC13.93□□□□□ -0.18
LRRK2Q5S007 AC125604.1-201ENST00000496255 707 ntBASIC13.93□□□□□ -0.18
LRRK2Q5S007 WSPAR-201ENST00000513561 683 ntTSL 3 BASIC13.93□□□□□ -0.18
LRRK2Q5S007 CFL1-206ENST00000527344 962 ntTSL 2 BASIC13.93□□□□□ -0.18
LRRK2Q5S007 UBXN1-214ENST00000533000 367 ntTSL 5 BASIC13.93□□□□□ -0.18
LRRK2Q5S007 SAP25-201ENST00000538735 837 ntAPPRIS P2 TSL 3 BASIC13.93□□□□□ -0.18
LRRK2Q5S007 AC078819.1-201ENST00000547454 765 ntBASIC13.93□□□□□ -0.18
LRRK2Q5S007 AC012085.1-201ENST00000548270 765 ntBASIC13.93□□□□□ -0.18
LRRK2Q5S007 AC005357.2-202ENST00000590507 1060 ntBASIC13.93□□□□□ -0.18
LRRK2Q5S007 RN7SL725P-201ENST00000606439 259 ntBASIC13.93□□□□□ -0.18
LRRK2Q5S007 CR589904.1-202ENST00000611154 660 ntTSL 5 BASIC13.93□□□□□ -0.18
LRRK2Q5S007 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LRRK2Q5S007 AC006277.1-201ENST00000624348 1610 ntBASIC13.93□□□□□ -0.18
LRRK2Q5S007 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LRRK2Q5S007 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC13.93□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms