Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
PCDH1Q08174 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
PCDH1Q08174 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC15.79■□□□□ 0.12
PCDH1Q08174 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC15.79■□□□□ 0.12
PCDH1Q08174 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
PCDH1Q08174 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC15.79■□□□□ 0.12
PCDH1Q08174 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC15.79■□□□□ 0.12
PCDH1Q08174 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC15.79■□□□□ 0.12
PCDH1Q08174 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
PCDH1Q08174 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC15.79■□□□□ 0.12
PCDH1Q08174 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC15.79■□□□□ 0.12
PCDH1Q08174 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
PCDH1Q08174 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PCDH1Q08174 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PCDH1Q08174 FLJ16779-201ENST00000612722 7638 ntBASIC15.79■□□□□ 0.12
PCDH1Q08174 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC15.79■□□□□ 0.12
PCDH1Q08174 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PCDH1Q08174 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC15.79■□□□□ 0.12
PCDH1Q08174 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC15.79■□□□□ 0.12
PCDH1Q08174 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PCDH1Q08174 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PCDH1Q08174 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
PCDH1Q08174 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC15.79■□□□□ 0.12
PCDH1Q08174 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
PCDH1Q08174 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PCDH1Q08174 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PCDH1Q08174 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC15.78■□□□□ 0.12
PCDH1Q08174 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PCDH1Q08174 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
PCDH1Q08174 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
PCDH1Q08174 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PCDH1Q08174 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC15.78■□□□□ 0.12
PCDH1Q08174 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC15.78■□□□□ 0.12
PCDH1Q08174 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC15.78■□□□□ 0.12
PCDH1Q08174 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
PCDH1Q08174 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
PCDH1Q08174 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
PCDH1Q08174 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC15.78■□□□□ 0.12
PCDH1Q08174 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC15.78■□□□□ 0.12
PCDH1Q08174 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC15.78■□□□□ 0.12
PCDH1Q08174 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PCDH1Q08174 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PCDH1Q08174 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PCDH1Q08174 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
PCDH1Q08174 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PCDH1Q08174 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
PCDH1Q08174 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC15.78■□□□□ 0.12
PCDH1Q08174 AC008677.1-201ENST00000519230 1561 ntBASIC15.78■□□□□ 0.12
PCDH1Q08174 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
PCDH1Q08174 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
PCDH1Q08174 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC15.78■□□□□ 0.12
PCDH1Q08174 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PCDH1Q08174 AL589702.1-201ENST00000641229 1509 ntBASIC15.78■□□□□ 0.12
PCDH1Q08174 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PCDH1Q08174 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PCDH1Q08174 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC15.78■□□□□ 0.12
PCDH1Q08174 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PCDH1Q08174 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PCDH1Q08174 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC15.77■□□□□ 0.12
PCDH1Q08174 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC15.77■□□□□ 0.12
PCDH1Q08174 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC15.77■□□□□ 0.12
PCDH1Q08174 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC15.77■□□□□ 0.12
PCDH1Q08174 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
PCDH1Q08174 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
PCDH1Q08174 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.12
PCDH1Q08174 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC15.77■□□□□ 0.12
PCDH1Q08174 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
PCDH1Q08174 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC15.77■□□□□ 0.12
PCDH1Q08174 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC15.77■□□□□ 0.12
PCDH1Q08174 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC15.77■□□□□ 0.12
PCDH1Q08174 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
PCDH1Q08174 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
PCDH1Q08174 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
PCDH1Q08174 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC15.77■□□□□ 0.12
PCDH1Q08174 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC15.77■□□□□ 0.12
PCDH1Q08174 MCCD1P2-201ENST00000423228 335 ntBASIC15.77■□□□□ 0.12
PCDH1Q08174 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
PCDH1Q08174 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
PCDH1Q08174 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC15.77■□□□□ 0.12
PCDH1Q08174 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC15.77■□□□□ 0.12
PCDH1Q08174 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
PCDH1Q08174 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC15.77■□□□□ 0.12
PCDH1Q08174 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC15.77■□□□□ 0.12
PCDH1Q08174 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
PCDH1Q08174 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
PCDH1Q08174 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
PCDH1Q08174 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
PCDH1Q08174 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
PCDH1Q08174 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC15.77■□□□□ 0.11
PCDH1Q08174 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
PCDH1Q08174 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC15.77■□□□□ 0.11
PCDH1Q08174 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
PCDH1Q08174 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
PCDH1Q08174 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC15.77■□□□□ 0.11
PCDH1Q08174 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
PCDH1Q08174 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
PCDH1Q08174 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
PCDH1Q08174 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
PCDH1Q08174 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.11
PCDH1Q08174 AC069224.1-201ENST00000566372 1715 ntBASIC15.77■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms