Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 AC000095.1-201ENST00000603208 874 ntBASIC18.32■□□□□ 0.52
TM4SF4P48230 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC18.32■□□□□ 0.52
TM4SF4P48230 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
TM4SF4P48230 AC135050.7-201ENST00000624508 2218 ntBASIC18.32■□□□□ 0.52
TM4SF4P48230 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TM4SF4P48230 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TM4SF4P48230 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC18.32■□□□□ 0.52
TM4SF4P48230 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC18.32■□□□□ 0.52
TM4SF4P48230 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TM4SF4P48230 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
TM4SF4P48230 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TM4SF4P48230 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TM4SF4P48230 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
TM4SF4P48230 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TM4SF4P48230 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC18.31■□□□□ 0.52
TM4SF4P48230 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
TM4SF4P48230 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TM4SF4P48230 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC18.31■□□□□ 0.52
TM4SF4P48230 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC18.31■□□□□ 0.52
TM4SF4P48230 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TM4SF4P48230 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TM4SF4P48230 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TM4SF4P48230 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC18.31■□□□□ 0.52
TM4SF4P48230 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
TM4SF4P48230 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC18.31■□□□□ 0.52
TM4SF4P48230 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
TM4SF4P48230 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC18.31■□□□□ 0.52
TM4SF4P48230 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TM4SF4P48230 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
TM4SF4P48230 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
TM4SF4P48230 SLED1-202ENST00000512051 380 ntBASIC18.31■□□□□ 0.52
TM4SF4P48230 MBP-227ENST00000526111 581 ntTSL 4 BASIC18.31■□□□□ 0.52
TM4SF4P48230 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TM4SF4P48230 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC18.31■□□□□ 0.52
TM4SF4P48230 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC18.31■□□□□ 0.52
TM4SF4P48230 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC18.31■□□□□ 0.52
TM4SF4P48230 CROCCP3-204ENST00000590118 574 ntTSL 4 BASIC18.31■□□□□ 0.52
TM4SF4P48230 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TM4SF4P48230 AC093813.1-201ENST00000605066 256 ntBASIC18.31■□□□□ 0.52
TM4SF4P48230 AC138951.2-201ENST00000623455 1161 ntBASIC18.31■□□□□ 0.52
TM4SF4P48230 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC18.31■□□□□ 0.52
TM4SF4P48230 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TM4SF4P48230 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
TM4SF4P48230 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TM4SF4P48230 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TM4SF4P48230 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TM4SF4P48230 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TM4SF4P48230 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
TM4SF4P48230 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
TM4SF4P48230 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC18.31■□□□□ 0.52
TM4SF4P48230 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
TM4SF4P48230 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TM4SF4P48230 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TM4SF4P48230 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
TM4SF4P48230 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TM4SF4P48230 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TM4SF4P48230 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TM4SF4P48230 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TM4SF4P48230 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TM4SF4P48230 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
TM4SF4P48230 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
TM4SF4P48230 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
TM4SF4P48230 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TM4SF4P48230 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC18.3■□□□□ 0.52
TM4SF4P48230 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC18.3■□□□□ 0.52
TM4SF4P48230 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC18.3■□□□□ 0.52
TM4SF4P48230 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC18.3■□□□□ 0.52
TM4SF4P48230 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TM4SF4P48230 TSACC-208ENST00000481479 741 ntTSL 2 BASIC18.3■□□□□ 0.52
TM4SF4P48230 PGAP2-224ENST00000490830 810 ntTSL 3 BASIC18.3■□□□□ 0.52
TM4SF4P48230 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC18.3■□□□□ 0.52
TM4SF4P48230 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC18.3■□□□□ 0.52
TM4SF4P48230 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC18.3■□□□□ 0.52
TM4SF4P48230 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC18.3■□□□□ 0.52
TM4SF4P48230 MIR5572-201ENST00000583188 137 ntBASIC18.3■□□□□ 0.52
TM4SF4P48230 EEF1DP1-201ENST00000585891 896 ntBASIC18.3■□□□□ 0.52
TM4SF4P48230 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC18.3■□□□□ 0.52
TM4SF4P48230 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TM4SF4P48230 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC18.3■□□□□ 0.52
TM4SF4P48230 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TM4SF4P48230 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC18.29■□□□□ 0.52
TM4SF4P48230 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
TM4SF4P48230 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TM4SF4P48230 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TM4SF4P48230 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
TM4SF4P48230 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TM4SF4P48230 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC18.29■□□□□ 0.52
TM4SF4P48230 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
TM4SF4P48230 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
TM4SF4P48230 CROCCP2-202ENST00000412962 2773 ntBASIC18.29■□□□□ 0.52
TM4SF4P48230 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
TM4SF4P48230 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC18.29■□□□□ 0.52
TM4SF4P48230 PEA15-203ENST00000368077 1021 ntTSL 2 BASIC18.29■□□□□ 0.52
TM4SF4P48230 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TM4SF4P48230 DYDC1-201ENST00000372202 612 ntAPPRIS P1 TSL 3 BASIC18.29■□□□□ 0.52
TM4SF4P48230 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
TM4SF4P48230 HNRNPA1P32-201ENST00000396326 963 ntBASIC18.29■□□□□ 0.52
TM4SF4P48230 AC104457.1-201ENST00000401024 814 ntBASIC18.29■□□□□ 0.52
TM4SF4P48230 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC18.29■□□□□ 0.52
TM4SF4P48230 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms