Protein–RNA interactions for Protein: P35606

COPB2, Coatomer subunit beta', humanhuman

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2P35606 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
COPB2P35606 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
COPB2P35606 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC18.61■□□□□ 0.57
COPB2P35606 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC18.61■□□□□ 0.57
COPB2P35606 AC011495.1-201ENST00000498085 584 ntBASIC18.61■□□□□ 0.57
COPB2P35606 RAB35-202ENST00000534951 939 ntTSL 2 BASIC18.61■□□□□ 0.57
COPB2P35606 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC18.61■□□□□ 0.57
COPB2P35606 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
COPB2P35606 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
COPB2P35606 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
COPB2P35606 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC18.61■□□□□ 0.57
COPB2P35606 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
COPB2P35606 TNRC18P3-201ENST00000441896 2691 ntBASIC18.61■□□□□ 0.57
COPB2P35606 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC18.61■□□□□ 0.57
COPB2P35606 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC18.61■□□□□ 0.57
COPB2P35606 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
COPB2P35606 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC18.6■□□□□ 0.57
COPB2P35606 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC18.6■□□□□ 0.57
COPB2P35606 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
COPB2P35606 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
COPB2P35606 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC18.6■□□□□ 0.57
COPB2P35606 SLC7A15P-201ENST00000424028 1363 ntBASIC18.6■□□□□ 0.57
COPB2P35606 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC18.6■□□□□ 0.57
COPB2P35606 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC18.6■□□□□ 0.57
COPB2P35606 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
COPB2P35606 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
COPB2P35606 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
COPB2P35606 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC18.6■□□□□ 0.57
COPB2P35606 GNAQP1-201ENST00000444815 1067 ntBASIC18.6■□□□□ 0.57
COPB2P35606 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC18.6■□□□□ 0.57
COPB2P35606 CD81-207ENST00000481687 890 ntTSL 2 BASIC18.6■□□□□ 0.57
COPB2P35606 AC099568.2-201ENST00000609194 695 ntBASIC18.6■□□□□ 0.57
COPB2P35606 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC18.6■□□□□ 0.57
COPB2P35606 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
COPB2P35606 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
COPB2P35606 AMT-206ENST00000458307 1860 ntTSL 2 BASIC18.6■□□□□ 0.57
COPB2P35606 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
COPB2P35606 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
COPB2P35606 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC18.6■□□□□ 0.57
COPB2P35606 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
COPB2P35606 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
COPB2P35606 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
COPB2P35606 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
COPB2P35606 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC18.6■□□□□ 0.57
COPB2P35606 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
COPB2P35606 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC18.6■□□□□ 0.57
COPB2P35606 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC18.6■□□□□ 0.57
COPB2P35606 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
COPB2P35606 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC18.6■□□□□ 0.57
COPB2P35606 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC18.6■□□□□ 0.57
COPB2P35606 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC18.6■□□□□ 0.57
COPB2P35606 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
COPB2P35606 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC18.59■□□□□ 0.57
COPB2P35606 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
COPB2P35606 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
COPB2P35606 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC18.59■□□□□ 0.57
COPB2P35606 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
COPB2P35606 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
COPB2P35606 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
COPB2P35606 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
COPB2P35606 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC18.59■□□□□ 0.57
COPB2P35606 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
COPB2P35606 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
COPB2P35606 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC18.59■□□□□ 0.57
COPB2P35606 U82695.1-201ENST00000635752 1889 ntBASIC18.59■□□□□ 0.57
COPB2P35606 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC18.59■□□□□ 0.57
COPB2P35606 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
COPB2P35606 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC18.59■□□□□ 0.57
COPB2P35606 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC18.59■□□□□ 0.57
COPB2P35606 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC18.59■□□□□ 0.57
COPB2P35606 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
COPB2P35606 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC18.59■□□□□ 0.57
COPB2P35606 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
COPB2P35606 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC18.59■□□□□ 0.57
COPB2P35606 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC18.59■□□□□ 0.57
COPB2P35606 SRD5A3P1-201ENST00000603021 949 ntBASIC18.59■□□□□ 0.57
COPB2P35606 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC18.59■□□□□ 0.57
COPB2P35606 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
COPB2P35606 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
COPB2P35606 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
COPB2P35606 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
COPB2P35606 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
COPB2P35606 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
COPB2P35606 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
COPB2P35606 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
COPB2P35606 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
COPB2P35606 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC18.58■□□□□ 0.57
COPB2P35606 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
COPB2P35606 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC18.58■□□□□ 0.57
COPB2P35606 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC18.58■□□□□ 0.57
COPB2P35606 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC18.58■□□□□ 0.57
COPB2P35606 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
COPB2P35606 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
COPB2P35606 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC18.58■□□□□ 0.57
COPB2P35606 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
COPB2P35606 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
COPB2P35606 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
COPB2P35606 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC18.58■□□□□ 0.56
COPB2P35606 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
COPB2P35606 FO393414.2-201ENST00000405153 598 ntBASIC18.58■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms