Protein–RNA interactions for Protein: P35499

SCN4A, Sodium channel protein type 4 subunit alpha, humanhuman

Predictions only

Length 1,836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4AP35499 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC18.91■□□□□ 0.62
SCN4AP35499 AC015818.8-201ENST00000587907 1519 ntBASIC18.91■□□□□ 0.62
SCN4AP35499 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC18.91■□□□□ 0.62
SCN4AP35499 AL391256.1-201ENST00000443260 1855 ntBASIC18.91■□□□□ 0.62
SCN4AP35499 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SCN4AP35499 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
SCN4AP35499 NUDT1-203ENST00000356714 662 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SCN4AP35499 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC18.91■□□□□ 0.62
SCN4AP35499 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SCN4AP35499 NUDT1-204ENST00000397046 712 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SCN4AP35499 MPV17-204ENST00000399052 749 ntTSL 4 BASIC18.91■□□□□ 0.62
SCN4AP35499 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC18.91■□□□□ 0.62
SCN4AP35499 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC18.91■□□□□ 0.62
SCN4AP35499 FTLP10-202ENST00000505798 471 ntBASIC18.91■□□□□ 0.62
SCN4AP35499 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SCN4AP35499 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC18.91■□□□□ 0.62
SCN4AP35499 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC18.91■□□□□ 0.62
SCN4AP35499 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SCN4AP35499 MIR7845-201ENST00000618396 99 ntBASIC18.91■□□□□ 0.62
SCN4AP35499 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
SCN4AP35499 DNAJC17-212ENST00000627802 428 ntTSL 4 BASIC18.91■□□□□ 0.62
SCN4AP35499 AC006453.4-201ENST00000636949 1252 ntBASIC18.91■□□□□ 0.62
SCN4AP35499 AL138709.1-201ENST00000614840 1693 ntBASIC18.91■□□□□ 0.62
SCN4AP35499 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SCN4AP35499 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC18.91■□□□□ 0.62
SCN4AP35499 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SCN4AP35499 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
SCN4AP35499 FOS-202ENST00000535987 1402 ntTSL 2 BASIC18.91■□□□□ 0.62
SCN4AP35499 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
SCN4AP35499 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC18.9■□□□□ 0.62
SCN4AP35499 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
SCN4AP35499 MIR769-201ENST00000390225 118 ntBASIC18.9■□□□□ 0.62
SCN4AP35499 AL136361.1-201ENST00000435429 506 ntTSL 3 BASIC18.9■□□□□ 0.62
SCN4AP35499 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC18.9■□□□□ 0.62
SCN4AP35499 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SCN4AP35499 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC18.9■□□□□ 0.62
SCN4AP35499 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC18.9■□□□□ 0.62
SCN4AP35499 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
SCN4AP35499 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SCN4AP35499 AC005622.1-201ENST00000636801 1703 ntBASIC18.9■□□□□ 0.62
SCN4AP35499 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SCN4AP35499 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC18.9■□□□□ 0.62
SCN4AP35499 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SCN4AP35499 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
SCN4AP35499 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
SCN4AP35499 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SCN4AP35499 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC18.9■□□□□ 0.62
SCN4AP35499 AL645728.1-201ENST00000366221 2101 ntBASIC18.9■□□□□ 0.62
SCN4AP35499 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC18.9■□□□□ 0.62
SCN4AP35499 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC18.9■□□□□ 0.62
SCN4AP35499 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SCN4AP35499 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
SCN4AP35499 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC18.9■□□□□ 0.62
SCN4AP35499 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC18.9■□□□□ 0.62
SCN4AP35499 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC18.9■□□□□ 0.62
SCN4AP35499 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC18.9■□□□□ 0.62
SCN4AP35499 RN7SL720P-201ENST00000488178 304 ntBASIC18.9■□□□□ 0.62
SCN4AP35499 KRT18P25-201ENST00000508931 1278 ntBASIC18.9■□□□□ 0.62
SCN4AP35499 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC18.9■□□□□ 0.62
SCN4AP35499 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SCN4AP35499 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SCN4AP35499 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
SCN4AP35499 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC18.9■□□□□ 0.62
SCN4AP35499 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC18.9■□□□□ 0.62
SCN4AP35499 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
SCN4AP35499 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
SCN4AP35499 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC18.9■□□□□ 0.62
SCN4AP35499 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC18.9■□□□□ 0.62
SCN4AP35499 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SCN4AP35499 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SCN4AP35499 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC18.89■□□□□ 0.62
SCN4AP35499 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
SCN4AP35499 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC18.89■□□□□ 0.61
SCN4AP35499 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC18.89■□□□□ 0.61
SCN4AP35499 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
SCN4AP35499 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SCN4AP35499 LBH-202ENST00000401506 485 ntTSL 3 BASIC18.89■□□□□ 0.61
SCN4AP35499 AC079178.1-201ENST00000420915 656 ntBASIC18.89■□□□□ 0.61
SCN4AP35499 EEF1DP6-201ENST00000449232 372 ntBASIC18.89■□□□□ 0.61
SCN4AP35499 SERPINA13P-202ENST00000478994 924 ntBASIC18.89■□□□□ 0.61
SCN4AP35499 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC18.89■□□□□ 0.61
SCN4AP35499 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC18.89■□□□□ 0.61
SCN4AP35499 C12orf73-211ENST00000553183 660 ntAPPRIS P1 TSL 3 BASIC18.89■□□□□ 0.61
SCN4AP35499 RN7SL574P-201ENST00000581512 297 ntBASIC18.89■□□□□ 0.61
SCN4AP35499 NKG7-204ENST00000595217 816 ntTSL 2 BASIC18.89■□□□□ 0.61
SCN4AP35499 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC18.89■□□□□ 0.61
SCN4AP35499 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
SCN4AP35499 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
SCN4AP35499 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC18.89■□□□□ 0.61
SCN4AP35499 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC18.89■□□□□ 0.61
SCN4AP35499 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC18.89■□□□□ 0.61
SCN4AP35499 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC18.89■□□□□ 0.61
SCN4AP35499 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC18.89■□□□□ 0.61
SCN4AP35499 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SCN4AP35499 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SCN4AP35499 AC135050.7-201ENST00000624508 2218 ntBASIC18.89■□□□□ 0.61
SCN4AP35499 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
SCN4AP35499 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
SCN4AP35499 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC18.88■□□□□ 0.61
SCN4AP35499 CABP1-203ENST00000351200 770 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 67.6 ms