Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
ERCC3P19447 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC18.91■□□□□ 0.62
ERCC3P19447 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ERCC3P19447 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC18.91■□□□□ 0.62
ERCC3P19447 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC18.91■□□□□ 0.62
ERCC3P19447 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ERCC3P19447 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC18.91■□□□□ 0.62
ERCC3P19447 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC18.91■□□□□ 0.62
ERCC3P19447 STOM-203ENST00000538954 1257 ntTSL 5 BASIC18.91■□□□□ 0.62
ERCC3P19447 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC18.91■□□□□ 0.62
ERCC3P19447 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC18.91■□□□□ 0.62
ERCC3P19447 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC18.91■□□□□ 0.62
ERCC3P19447 AC105021.1-202ENST00000570572 669 ntBASIC18.91■□□□□ 0.62
ERCC3P19447 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC18.91■□□□□ 0.62
ERCC3P19447 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC18.91■□□□□ 0.62
ERCC3P19447 SRP9-204ENST00000619790 377 ntTSL 2 BASIC18.91■□□□□ 0.62
ERCC3P19447 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
ERCC3P19447 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
ERCC3P19447 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC18.91■□□□□ 0.62
ERCC3P19447 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ERCC3P19447 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC18.91■□□□□ 0.62
ERCC3P19447 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC18.91■□□□□ 0.62
ERCC3P19447 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
ERCC3P19447 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
ERCC3P19447 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC18.91■□□□□ 0.62
ERCC3P19447 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
ERCC3P19447 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC18.91■□□□□ 0.62
ERCC3P19447 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
ERCC3P19447 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
ERCC3P19447 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
ERCC3P19447 KRT8P39-201ENST00000396270 1433 ntBASIC18.91■□□□□ 0.62
ERCC3P19447 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
ERCC3P19447 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
ERCC3P19447 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ERCC3P19447 AC105020.1-201ENST00000435356 2205 ntBASIC18.9■□□□□ 0.62
ERCC3P19447 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC18.9■□□□□ 0.62
ERCC3P19447 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
ERCC3P19447 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
ERCC3P19447 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC18.9■□□□□ 0.62
ERCC3P19447 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
ERCC3P19447 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ERCC3P19447 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC18.9■□□□□ 0.62
ERCC3P19447 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ERCC3P19447 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
ERCC3P19447 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ERCC3P19447 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC18.9■□□□□ 0.62
ERCC3P19447 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
ERCC3P19447 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC18.9■□□□□ 0.62
ERCC3P19447 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC18.9■□□□□ 0.62
ERCC3P19447 RNA5SP410-201ENST00000516285 106 ntBASIC18.9■□□□□ 0.62
ERCC3P19447 MAX-210ENST00000555419 765 ntTSL 5 BASIC18.9■□□□□ 0.62
ERCC3P19447 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC18.9■□□□□ 0.62
ERCC3P19447 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC18.9■□□□□ 0.62
ERCC3P19447 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC18.9■□□□□ 0.62
ERCC3P19447 RPS15-212ENST00000593052 629 ntTSL 2 BASIC18.9■□□□□ 0.62
ERCC3P19447 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ERCC3P19447 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC18.9■□□□□ 0.62
ERCC3P19447 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ERCC3P19447 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ERCC3P19447 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC18.9■□□□□ 0.62
ERCC3P19447 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC18.9■□□□□ 0.62
ERCC3P19447 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
ERCC3P19447 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ERCC3P19447 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ERCC3P19447 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ERCC3P19447 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
ERCC3P19447 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
ERCC3P19447 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.62
ERCC3P19447 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
ERCC3P19447 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
ERCC3P19447 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ERCC3P19447 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ERCC3P19447 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC18.89■□□□□ 0.61
ERCC3P19447 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ERCC3P19447 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
ERCC3P19447 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
ERCC3P19447 DPM2-202ENST00000373110 738 ntTSL 2 BASIC18.89■□□□□ 0.61
ERCC3P19447 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC18.89■□□□□ 0.61
ERCC3P19447 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC18.89■□□□□ 0.61
ERCC3P19447 COX5BP8-201ENST00000416911 349 ntBASIC18.89■□□□□ 0.61
ERCC3P19447 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC18.89■□□□□ 0.61
ERCC3P19447 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC18.89■□□□□ 0.61
ERCC3P19447 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC18.89■□□□□ 0.61
ERCC3P19447 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC18.89■□□□□ 0.61
ERCC3P19447 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC18.89■□□□□ 0.61
ERCC3P19447 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
ERCC3P19447 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
ERCC3P19447 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ERCC3P19447 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ERCC3P19447 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
ERCC3P19447 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
ERCC3P19447 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC18.89■□□□□ 0.61
ERCC3P19447 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
ERCC3P19447 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC18.89■□□□□ 0.61
ERCC3P19447 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
ERCC3P19447 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
ERCC3P19447 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ERCC3P19447 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ERCC3P19447 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ERCC3P19447 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms