Protein–RNA interactions for Protein: P18206

VCL, Vinculin, humanhuman

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCLP18206 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
VCLP18206 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
VCLP18206 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
VCLP18206 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
VCLP18206 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
VCLP18206 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
VCLP18206 RPSAP43-201ENST00000402237 625 ntBASIC16.5■□□□□ 0.23
VCLP18206 FAM58CP-201ENST00000435741 640 ntBASIC16.5■□□□□ 0.23
VCLP18206 AC140658.5-201ENST00000438532 169 ntBASIC16.5■□□□□ 0.23
VCLP18206 HLA-J-202ENST00000469281 1241 ntBASIC16.5■□□□□ 0.23
VCLP18206 THTPA-204ENST00000554970 569 ntTSL 4 BASIC16.5■□□□□ 0.23
VCLP18206 THTPA-206ENST00000556015 535 ntTSL 3 BASIC16.5■□□□□ 0.23
VCLP18206 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
VCLP18206 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
VCLP18206 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC16.5■□□□□ 0.23
VCLP18206 AL365203.3-201ENST00000609742 2057 ntBASIC16.5■□□□□ 0.23
VCLP18206 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC16.5■□□□□ 0.23
VCLP18206 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
VCLP18206 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
VCLP18206 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
VCLP18206 AC092384.3-202ENST00000564646 2873 ntBASIC16.5■□□□□ 0.23
VCLP18206 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
VCLP18206 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
VCLP18206 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
VCLP18206 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
VCLP18206 SLC22A20-204ENST00000530038 1673 ntBASIC16.5■□□□□ 0.23
VCLP18206 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
VCLP18206 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
VCLP18206 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC16.49■□□□□ 0.23
VCLP18206 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
VCLP18206 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
VCLP18206 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
VCLP18206 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
VCLP18206 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
VCLP18206 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
VCLP18206 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
VCLP18206 HMGA1P7-201ENST00000406908 502 ntBASIC16.49■□□□□ 0.23
VCLP18206 HTR5BP-201ENST00000430851 1154 ntBASIC16.49■□□□□ 0.23
VCLP18206 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
VCLP18206 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC16.49■□□□□ 0.23
VCLP18206 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC16.49■□□□□ 0.23
VCLP18206 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
VCLP18206 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC16.49■□□□□ 0.23
VCLP18206 GPALPP1-207ENST00000611650 899 ntBASIC16.49■□□□□ 0.23
VCLP18206 AC079781.4-201ENST00000641908 219 ntBASIC16.49■□□□□ 0.23
VCLP18206 AL139011.1-202ENST00000642063 584 ntBASIC16.49■□□□□ 0.23
VCLP18206 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
VCLP18206 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC16.49■□□□□ 0.23
VCLP18206 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
VCLP18206 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
VCLP18206 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
VCLP18206 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
VCLP18206 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
VCLP18206 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
VCLP18206 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
VCLP18206 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
VCLP18206 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
VCLP18206 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
VCLP18206 HARS-204ENST00000438307 1789 ntTSL 2 BASIC16.49■□□□□ 0.23
VCLP18206 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
VCLP18206 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
VCLP18206 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
VCLP18206 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
VCLP18206 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
VCLP18206 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
VCLP18206 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
VCLP18206 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC16.48■□□□□ 0.23
VCLP18206 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC16.48■□□□□ 0.23
VCLP18206 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
VCLP18206 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
VCLP18206 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
VCLP18206 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
VCLP18206 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
VCLP18206 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC16.48■□□□□ 0.23
VCLP18206 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC16.48■□□□□ 0.23
VCLP18206 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
VCLP18206 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC16.48■□□□□ 0.23
VCLP18206 AC006538.1-201ENST00000567905 1585 ntBASIC16.48■□□□□ 0.23
VCLP18206 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
VCLP18206 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
VCLP18206 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
VCLP18206 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
VCLP18206 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
VCLP18206 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
VCLP18206 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC16.48■□□□□ 0.23
VCLP18206 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
VCLP18206 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC16.48■□□□□ 0.23
VCLP18206 AC112482.1-201ENST00000492080 688 ntBASIC16.48■□□□□ 0.23
VCLP18206 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC16.48■□□□□ 0.23
VCLP18206 DHDH-204ENST00000523250 634 ntTSL 5 BASIC16.48■□□□□ 0.23
VCLP18206 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC16.48■□□□□ 0.23
VCLP18206 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
VCLP18206 CYP2A7P1-201ENST00000595391 815 ntBASIC16.48■□□□□ 0.23
VCLP18206 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC16.48■□□□□ 0.23
VCLP18206 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC16.48■□□□□ 0.23
VCLP18206 AL078644.1-201ENST00000609881 752 ntBASIC16.48■□□□□ 0.23
VCLP18206 AC091812.2-201ENST00000619081 385 ntBASIC16.48■□□□□ 0.23
VCLP18206 AL161645.1-201ENST00000622716 1255 ntBASIC16.48■□□□□ 0.23
VCLP18206 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
VCLP18206 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms