Protein–RNA interactions for Protein: P08684

CYP3A4, Cytochrome P450 3A4, humanhuman

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYP3A4P08684 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CYP3A4P08684 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC18.26■□□□□ 0.51
CYP3A4P08684 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CYP3A4P08684 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CYP3A4P08684 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC18.26■□□□□ 0.51
CYP3A4P08684 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC18.26■□□□□ 0.51
CYP3A4P08684 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC18.26■□□□□ 0.51
CYP3A4P08684 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC18.26■□□□□ 0.51
CYP3A4P08684 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC18.26■□□□□ 0.51
CYP3A4P08684 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CYP3A4P08684 FO393414.2-201ENST00000405153 598 ntBASIC18.26■□□□□ 0.51
CYP3A4P08684 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC18.26■□□□□ 0.51
CYP3A4P08684 HIST3H2BA-201ENST00000436555 524 ntBASIC18.26■□□□□ 0.51
CYP3A4P08684 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC18.26■□□□□ 0.51
CYP3A4P08684 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC18.26■□□□□ 0.51
CYP3A4P08684 AC009477.1-201ENST00000452936 217 ntBASIC18.26■□□□□ 0.51
CYP3A4P08684 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC18.26■□□□□ 0.51
CYP3A4P08684 ZNF890P-202ENST00000530367 1156 ntBASIC18.26■□□□□ 0.51
CYP3A4P08684 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CYP3A4P08684 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC18.26■□□□□ 0.51
CYP3A4P08684 AC011467.4-201ENST00000594891 528 ntBASIC18.26■□□□□ 0.51
CYP3A4P08684 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC18.26■□□□□ 0.51
CYP3A4P08684 AJ011932.1-201ENST00000621707 465 ntBASIC18.26■□□□□ 0.51
CYP3A4P08684 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CYP3A4P08684 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC18.26■□□□□ 0.51
CYP3A4P08684 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC18.26■□□□□ 0.51
CYP3A4P08684 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CYP3A4P08684 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CYP3A4P08684 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CYP3A4P08684 CYP2T1P-202ENST00000641596 2535 ntBASIC18.26■□□□□ 0.51
CYP3A4P08684 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC18.26■□□□□ 0.51
CYP3A4P08684 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CYP3A4P08684 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CYP3A4P08684 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CYP3A4P08684 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CYP3A4P08684 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC18.26■□□□□ 0.51
CYP3A4P08684 AL662844.4-201ENST00000606367 2838 ntBASIC18.26■□□□□ 0.51
CYP3A4P08684 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CYP3A4P08684 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
CYP3A4P08684 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CYP3A4P08684 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CYP3A4P08684 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CYP3A4P08684 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC18.25■□□□□ 0.51
CYP3A4P08684 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC18.25■□□□□ 0.51
CYP3A4P08684 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CYP3A4P08684 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CYP3A4P08684 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
CYP3A4P08684 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CYP3A4P08684 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC18.25■□□□□ 0.51
CYP3A4P08684 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC18.25■□□□□ 0.51
CYP3A4P08684 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CYP3A4P08684 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
CYP3A4P08684 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CYP3A4P08684 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
CYP3A4P08684 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC18.25■□□□□ 0.51
CYP3A4P08684 CENPM-206ENST00000407253 818 ntTSL 2 BASIC18.25■□□□□ 0.51
CYP3A4P08684 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC18.25■□□□□ 0.51
CYP3A4P08684 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC18.25■□□□□ 0.51
CYP3A4P08684 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC18.25■□□□□ 0.51
CYP3A4P08684 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC18.25■□□□□ 0.51
CYP3A4P08684 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
CYP3A4P08684 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC18.25■□□□□ 0.51
CYP3A4P08684 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC18.25■□□□□ 0.51
CYP3A4P08684 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
CYP3A4P08684 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC18.25■□□□□ 0.51
CYP3A4P08684 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CYP3A4P08684 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
CYP3A4P08684 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CYP3A4P08684 BNIP3P1-202ENST00000550043 1585 ntBASIC18.25■□□□□ 0.51
CYP3A4P08684 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC18.25■□□□□ 0.51
CYP3A4P08684 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CYP3A4P08684 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CYP3A4P08684 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
CYP3A4P08684 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
CYP3A4P08684 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CYP3A4P08684 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
CYP3A4P08684 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
CYP3A4P08684 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CYP3A4P08684 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CYP3A4P08684 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC18.24■□□□□ 0.51
CYP3A4P08684 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CYP3A4P08684 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CYP3A4P08684 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
CYP3A4P08684 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CYP3A4P08684 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CYP3A4P08684 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC18.24■□□□□ 0.51
CYP3A4P08684 HNRNPA3P1-201ENST00000401429 1139 ntBASIC18.24■□□□□ 0.51
CYP3A4P08684 MRPS18AP1-201ENST00000414458 589 ntBASIC18.24■□□□□ 0.51
CYP3A4P08684 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC18.24■□□□□ 0.51
CYP3A4P08684 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CYP3A4P08684 HNRNPA3P5-201ENST00000455201 833 ntBASIC18.24■□□□□ 0.51
CYP3A4P08684 INGX-202ENST00000489074 768 ntBASIC18.24■□□□□ 0.51
CYP3A4P08684 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CYP3A4P08684 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC18.24■□□□□ 0.51
CYP3A4P08684 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC18.24■□□□□ 0.51
CYP3A4P08684 AL033527.5-202ENST00000641632 1098 ntBASIC18.24■□□□□ 0.51
CYP3A4P08684 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
CYP3A4P08684 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
CYP3A4P08684 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CYP3A4P08684 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC18.24■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms