Protein–RNA interactions for Protein: P01733

TRBV12-3, T-cell receptor beta chain V region YT35, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV12-3P01733 AP000344.2-201ENST00000512987 629 ntBASIC12.65□□□□□ -0.38
TRBV12-3P01733 AC105233.2-201ENST00000523697 349 ntBASIC12.65□□□□□ -0.38
TRBV12-3P01733 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC12.65□□□□□ -0.38
TRBV12-3P01733 AF228730.5-201ENST00000530288 346 ntBASIC12.65□□□□□ -0.38
TRBV12-3P01733 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.38
TRBV12-3P01733 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
TRBV12-3P01733 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
TRBV12-3P01733 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC12.65□□□□□ -0.38
TRBV12-3P01733 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC12.65□□□□□ -0.38
TRBV12-3P01733 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
TRBV12-3P01733 GCK-209ENST00000616242 2260 ntTSL 5 BASIC12.65□□□□□ -0.38
TRBV12-3P01733 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC12.65□□□□□ -0.38
TRBV12-3P01733 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
TRBV12-3P01733 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
TRBV12-3P01733 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
TRBV12-3P01733 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
TRBV12-3P01733 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC12.65□□□□□ -0.38
TRBV12-3P01733 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC12.65□□□□□ -0.38
TRBV12-3P01733 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC12.65□□□□□ -0.38
TRBV12-3P01733 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC12.65□□□□□ -0.38
TRBV12-3P01733 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
TRBV12-3P01733 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
TRBV12-3P01733 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
TRBV12-3P01733 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
TRBV12-3P01733 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC12.65□□□□□ -0.38
TRBV12-3P01733 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
TRBV12-3P01733 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
TRBV12-3P01733 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
TRBV12-3P01733 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC12.65□□□□□ -0.39
TRBV12-3P01733 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
TRBV12-3P01733 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
TRBV12-3P01733 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
TRBV12-3P01733 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
TRBV12-3P01733 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
TRBV12-3P01733 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC12.64□□□□□ -0.39
TRBV12-3P01733 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
TRBV12-3P01733 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
TRBV12-3P01733 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
TRBV12-3P01733 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
TRBV12-3P01733 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC12.64□□□□□ -0.39
TRBV12-3P01733 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
TRBV12-3P01733 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC12.64□□□□□ -0.39
TRBV12-3P01733 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
TRBV12-3P01733 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC12.64□□□□□ -0.39
TRBV12-3P01733 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
TRBV12-3P01733 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
TRBV12-3P01733 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
TRBV12-3P01733 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
TRBV12-3P01733 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
TRBV12-3P01733 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
TRBV12-3P01733 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
TRBV12-3P01733 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
TRBV12-3P01733 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC12.64□□□□□ -0.39
TRBV12-3P01733 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
TRBV12-3P01733 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC12.64□□□□□ -0.39
TRBV12-3P01733 AL627223.1-201ENST00000416693 442 ntBASIC12.64□□□□□ -0.39
TRBV12-3P01733 AC254562.1-201ENST00000417586 456 ntBASIC12.64□□□□□ -0.39
TRBV12-3P01733 KRT18P32-201ENST00000424695 1287 ntBASIC12.64□□□□□ -0.39
TRBV12-3P01733 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
TRBV12-3P01733 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC12.64□□□□□ -0.39
TRBV12-3P01733 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
TRBV12-3P01733 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
TRBV12-3P01733 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC12.64□□□□□ -0.39
TRBV12-3P01733 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC12.64□□□□□ -0.39
TRBV12-3P01733 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC12.64□□□□□ -0.39
TRBV12-3P01733 AC073389.1-201ENST00000595595 795 ntBASIC12.64□□□□□ -0.39
TRBV12-3P01733 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC12.64□□□□□ -0.39
TRBV12-3P01733 AC004835.2-201ENST00000603762 682 ntBASIC12.64□□□□□ -0.39
TRBV12-3P01733 AC027612.4-201ENST00000605371 583 ntBASIC12.64□□□□□ -0.39
TRBV12-3P01733 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC12.64□□□□□ -0.39
TRBV12-3P01733 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC12.64□□□□□ -0.39
TRBV12-3P01733 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
TRBV12-3P01733 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
TRBV12-3P01733 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
TRBV12-3P01733 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC12.64□□□□□ -0.39
TRBV12-3P01733 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
TRBV12-3P01733 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
TRBV12-3P01733 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
TRBV12-3P01733 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC12.64□□□□□ -0.39
TRBV12-3P01733 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
TRBV12-3P01733 GOLGA2P9-201ENST00000596977 1937 ntBASIC12.64□□□□□ -0.39
TRBV12-3P01733 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC12.64□□□□□ -0.39
TRBV12-3P01733 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC12.64□□□□□ -0.39
TRBV12-3P01733 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
TRBV12-3P01733 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
TRBV12-3P01733 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
TRBV12-3P01733 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
TRBV12-3P01733 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
TRBV12-3P01733 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC12.64□□□□□ -0.39
TRBV12-3P01733 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC12.64□□□□□ -0.39
TRBV12-3P01733 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
TRBV12-3P01733 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
TRBV12-3P01733 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
TRBV12-3P01733 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
TRBV12-3P01733 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
TRBV12-3P01733 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC12.63□□□□□ -0.39
TRBV12-3P01733 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
TRBV12-3P01733 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
TRBV12-3P01733 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
TRBV12-3P01733 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC12.63□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms