Protein–RNA interactions for Protein: O95243

MBD4, Methyl-CpG-binding domain protein 4, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4O95243 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
MBD4O95243 AC100757.3-201ENST00000622361 1406 ntBASIC19.42■□□□□ 0.7
MBD4O95243 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
MBD4O95243 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
MBD4O95243 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
MBD4O95243 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
MBD4O95243 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC19.42■□□□□ 0.7
MBD4O95243 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
MBD4O95243 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
MBD4O95243 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC19.42■□□□□ 0.7
MBD4O95243 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC19.42■□□□□ 0.7
MBD4O95243 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC19.42■□□□□ 0.7
MBD4O95243 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC19.42■□□□□ 0.7
MBD4O95243 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
MBD4O95243 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC19.42■□□□□ 0.7
MBD4O95243 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
MBD4O95243 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC19.42■□□□□ 0.7
MBD4O95243 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
MBD4O95243 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC19.42■□□□□ 0.7
MBD4O95243 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
MBD4O95243 AL079307.3-201ENST00000556114 283 ntBASIC19.42■□□□□ 0.7
MBD4O95243 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC19.42■□□□□ 0.7
MBD4O95243 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC19.42■□□□□ 0.7
MBD4O95243 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
MBD4O95243 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
MBD4O95243 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
MBD4O95243 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC19.42■□□□□ 0.7
MBD4O95243 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC19.42■□□□□ 0.7
MBD4O95243 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
MBD4O95243 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
MBD4O95243 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
MBD4O95243 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
MBD4O95243 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
MBD4O95243 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
MBD4O95243 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
MBD4O95243 PCDH8P1-201ENST00000428983 2773 ntBASIC19.42■□□□□ 0.7
MBD4O95243 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
MBD4O95243 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
MBD4O95243 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC19.41■□□□□ 0.7
MBD4O95243 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC19.41■□□□□ 0.7
MBD4O95243 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
MBD4O95243 AC084018.2-201ENST00000613093 2607 ntBASIC19.41■□□□□ 0.7
MBD4O95243 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC19.41■□□□□ 0.7
MBD4O95243 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
MBD4O95243 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
MBD4O95243 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
MBD4O95243 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
MBD4O95243 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
MBD4O95243 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
MBD4O95243 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
MBD4O95243 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
MBD4O95243 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC19.41■□□□□ 0.7
MBD4O95243 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
MBD4O95243 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
MBD4O95243 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC19.41■□□□□ 0.7
MBD4O95243 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC19.41■□□□□ 0.7
MBD4O95243 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
MBD4O95243 AL080243.2-201ENST00000418783 582 ntBASIC19.41■□□□□ 0.7
MBD4O95243 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC19.41■□□□□ 0.7
MBD4O95243 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
MBD4O95243 NAA60-208ENST00000570819 833 ntTSL 2 BASIC19.41■□□□□ 0.7
MBD4O95243 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
MBD4O95243 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC19.41■□□□□ 0.7
MBD4O95243 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
MBD4O95243 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC19.41■□□□□ 0.7
MBD4O95243 AL096865.1-201ENST00000606796 927 ntBASIC19.41■□□□□ 0.7
MBD4O95243 TEX28P1-201ENST00000613479 1221 ntBASIC19.41■□□□□ 0.7
MBD4O95243 TEX28P2-201ENST00000617764 1221 ntBASIC19.41■□□□□ 0.7
MBD4O95243 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC19.41■□□□□ 0.7
MBD4O95243 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
MBD4O95243 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
MBD4O95243 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC19.41■□□□□ 0.7
MBD4O95243 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
MBD4O95243 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
MBD4O95243 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC19.41■□□□□ 0.7
MBD4O95243 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
MBD4O95243 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
MBD4O95243 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC19.41■□□□□ 0.7
MBD4O95243 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC19.41■□□□□ 0.7
MBD4O95243 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
MBD4O95243 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
MBD4O95243 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
MBD4O95243 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC19.4■□□□□ 0.7
MBD4O95243 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
MBD4O95243 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
MBD4O95243 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
MBD4O95243 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC19.4■□□□□ 0.7
MBD4O95243 AL136982.4-201ENST00000437689 1740 ntBASIC19.4■□□□□ 0.7
MBD4O95243 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC19.4■□□□□ 0.7
MBD4O95243 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC19.4■□□□□ 0.7
MBD4O95243 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC19.4■□□□□ 0.7
MBD4O95243 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC19.4■□□□□ 0.7
MBD4O95243 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
MBD4O95243 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
MBD4O95243 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
MBD4O95243 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC19.4■□□□□ 0.7
MBD4O95243 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
MBD4O95243 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
MBD4O95243 TSSK5P-201ENST00000423978 907 ntBASIC19.4■□□□□ 0.7
MBD4O95243 AC241585.1-201ENST00000433527 519 ntBASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms