Protein–RNA interactions for Protein: O95076

ALX3, Homeobox protein aristaless-like 3, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALX3O95076 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
ALX3O95076 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
ALX3O95076 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC14.56□□□□□ -0.08
ALX3O95076 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
ALX3O95076 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
ALX3O95076 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
ALX3O95076 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
ALX3O95076 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
ALX3O95076 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
ALX3O95076 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC14.56□□□□□ -0.08
ALX3O95076 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
ALX3O95076 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
ALX3O95076 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
ALX3O95076 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
ALX3O95076 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
ALX3O95076 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC14.56□□□□□ -0.08
ALX3O95076 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
ALX3O95076 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
ALX3O95076 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
ALX3O95076 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC14.55□□□□□ -0.08
ALX3O95076 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
ALX3O95076 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC14.55□□□□□ -0.08
ALX3O95076 PC-204ENST00000524491 1714 ntTSL 2 BASIC14.55□□□□□ -0.08
ALX3O95076 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC14.55□□□□□ -0.08
ALX3O95076 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
ALX3O95076 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
ALX3O95076 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC14.55□□□□□ -0.08
ALX3O95076 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
ALX3O95076 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
ALX3O95076 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
ALX3O95076 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
ALX3O95076 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC14.55□□□□□ -0.08
ALX3O95076 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
ALX3O95076 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
ALX3O95076 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
ALX3O95076 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
ALX3O95076 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC14.55□□□□□ -0.08
ALX3O95076 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
ALX3O95076 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
ALX3O95076 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
ALX3O95076 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
ALX3O95076 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
ALX3O95076 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
ALX3O95076 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
ALX3O95076 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
ALX3O95076 AC106795.1-205ENST00000512851 1056 ntBASIC14.55□□□□□ -0.08
ALX3O95076 FICD-205ENST00000552758 603 ntTSL 2 BASIC14.55□□□□□ -0.08
ALX3O95076 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC14.55□□□□□ -0.08
ALX3O95076 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC14.55□□□□□ -0.08
ALX3O95076 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
ALX3O95076 AL591684.3-201ENST00000605187 298 ntBASIC14.55□□□□□ -0.08
ALX3O95076 AC069148.1-201ENST00000608741 768 ntBASIC14.55□□□□□ -0.08
ALX3O95076 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
ALX3O95076 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC14.55□□□□□ -0.08
ALX3O95076 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC14.55□□□□□ -0.08
ALX3O95076 BCL10-202ENST00000620248 774 ntTSL 5 BASIC14.55□□□□□ -0.08
ALX3O95076 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
ALX3O95076 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC14.55□□□□□ -0.08
ALX3O95076 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
ALX3O95076 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
ALX3O95076 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
ALX3O95076 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
ALX3O95076 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
ALX3O95076 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
ALX3O95076 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
ALX3O95076 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC14.55□□□□□ -0.08
ALX3O95076 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
ALX3O95076 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC14.55□□□□□ -0.08
ALX3O95076 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC14.55□□□□□ -0.08
ALX3O95076 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
ALX3O95076 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
ALX3O95076 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
ALX3O95076 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
ALX3O95076 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC14.55□□□□□ -0.08
ALX3O95076 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
ALX3O95076 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
ALX3O95076 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC14.55□□□□□ -0.08
ALX3O95076 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC14.55□□□□□ -0.08
ALX3O95076 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
ALX3O95076 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC14.55□□□□□ -0.08
ALX3O95076 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
ALX3O95076 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
ALX3O95076 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
ALX3O95076 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC14.55□□□□□ -0.08
ALX3O95076 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
ALX3O95076 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
ALX3O95076 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
ALX3O95076 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
ALX3O95076 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC14.54□□□□□ -0.08
ALX3O95076 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
ALX3O95076 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC14.54□□□□□ -0.08
ALX3O95076 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC14.54□□□□□ -0.08
ALX3O95076 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
ALX3O95076 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
ALX3O95076 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
ALX3O95076 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
ALX3O95076 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
ALX3O95076 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
ALX3O95076 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
ALX3O95076 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC14.54□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms