Protein–RNA interactions for Protein: O94985

CLSTN1, Calsyntenin-1, humanhuman

Predictions only

Length 981 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1O94985 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CLSTN1O94985 GCK-202ENST00000345378 2421 ntTSL 2 BASIC18.18■□□□□ 0.5
CLSTN1O94985 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CLSTN1O94985 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
CLSTN1O94985 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC18.18■□□□□ 0.5
CLSTN1O94985 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC18.18■□□□□ 0.5
CLSTN1O94985 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CLSTN1O94985 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC18.18■□□□□ 0.5
CLSTN1O94985 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC18.18■□□□□ 0.5
CLSTN1O94985 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC18.18■□□□□ 0.5
CLSTN1O94985 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC18.18■□□□□ 0.5
CLSTN1O94985 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC18.18■□□□□ 0.5
CLSTN1O94985 AP001350.2-201ENST00000625104 1094 ntBASIC18.18■□□□□ 0.5
CLSTN1O94985 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CLSTN1O94985 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC18.18■□□□□ 0.5
CLSTN1O94985 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC18.18■□□□□ 0.5
CLSTN1O94985 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CLSTN1O94985 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CLSTN1O94985 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC18.18■□□□□ 0.5
CLSTN1O94985 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CLSTN1O94985 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CLSTN1O94985 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC18.18■□□□□ 0.5
CLSTN1O94985 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CLSTN1O94985 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC18.18■□□□□ 0.5
CLSTN1O94985 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CLSTN1O94985 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
CLSTN1O94985 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC18.18■□□□□ 0.5
CLSTN1O94985 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
CLSTN1O94985 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CLSTN1O94985 AL391256.1-201ENST00000443260 1855 ntBASIC18.18■□□□□ 0.5
CLSTN1O94985 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
CLSTN1O94985 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC18.18■□□□□ 0.5
CLSTN1O94985 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
CLSTN1O94985 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CLSTN1O94985 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
CLSTN1O94985 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
CLSTN1O94985 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CLSTN1O94985 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CLSTN1O94985 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
CLSTN1O94985 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CLSTN1O94985 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CLSTN1O94985 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CLSTN1O94985 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
CLSTN1O94985 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC18.17■□□□□ 0.5
CLSTN1O94985 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CLSTN1O94985 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
CLSTN1O94985 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC18.17■□□□□ 0.5
CLSTN1O94985 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
CLSTN1O94985 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
CLSTN1O94985 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
CLSTN1O94985 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC18.17■□□□□ 0.5
CLSTN1O94985 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC18.17■□□□□ 0.5
CLSTN1O94985 KRT18P58-201ENST00000527480 1120 ntBASIC18.17■□□□□ 0.5
CLSTN1O94985 AC107918.2-201ENST00000530817 355 ntBASIC18.17■□□□□ 0.5
CLSTN1O94985 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC18.17■□□□□ 0.5
CLSTN1O94985 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC18.17■□□□□ 0.5
CLSTN1O94985 AC005412.3-201ENST00000580309 715 ntBASIC18.17■□□□□ 0.5
CLSTN1O94985 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC18.17■□□□□ 0.5
CLSTN1O94985 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC18.17■□□□□ 0.5
CLSTN1O94985 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
CLSTN1O94985 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CLSTN1O94985 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
CLSTN1O94985 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CLSTN1O94985 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CLSTN1O94985 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
CLSTN1O94985 ANKRD26P3-201ENST00000454044 2748 ntBASIC18.17■□□□□ 0.5
CLSTN1O94985 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CLSTN1O94985 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CLSTN1O94985 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
CLSTN1O94985 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
CLSTN1O94985 ADGRL1-201ENST00000340736 7853 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
CLSTN1O94985 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
CLSTN1O94985 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CLSTN1O94985 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CLSTN1O94985 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CLSTN1O94985 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
CLSTN1O94985 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC18.17■□□□□ 0.5
CLSTN1O94985 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
CLSTN1O94985 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
CLSTN1O94985 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CLSTN1O94985 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CLSTN1O94985 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC18.16■□□□□ 0.5
CLSTN1O94985 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
CLSTN1O94985 OAS3-201ENST00000228928 6719 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CLSTN1O94985 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC18.16■□□□□ 0.5
CLSTN1O94985 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CLSTN1O94985 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CLSTN1O94985 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CLSTN1O94985 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
CLSTN1O94985 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC18.16■□□□□ 0.5
CLSTN1O94985 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC18.16■□□□□ 0.5
CLSTN1O94985 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
CLSTN1O94985 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CLSTN1O94985 AL353732.1-201ENST00000569618 1459 ntBASIC18.16■□□□□ 0.5
CLSTN1O94985 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
CLSTN1O94985 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
CLSTN1O94985 AC131009.4-201ENST00000624048 1740 ntBASIC18.16■□□□□ 0.5
CLSTN1O94985 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC18.16■□□□□ 0.5
CLSTN1O94985 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC18.16■□□□□ 0.5
CLSTN1O94985 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC18.16■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms