Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC16.46■□□□□ 0.23
GPC4O75487 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC16.46■□□□□ 0.23
GPC4O75487 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
GPC4O75487 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
GPC4O75487 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC16.46■□□□□ 0.23
GPC4O75487 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC16.46■□□□□ 0.23
GPC4O75487 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC16.46■□□□□ 0.23
GPC4O75487 AC140113.2-201ENST00000604370 208 ntBASIC16.46■□□□□ 0.23
GPC4O75487 WT1-AS_2.1-201ENST00000613208 137 ntBASIC16.46■□□□□ 0.23
GPC4O75487 AQP6-205ENST00000618286 829 ntTSL 5 BASIC16.46■□□□□ 0.23
GPC4O75487 AP001350.2-201ENST00000625104 1094 ntBASIC16.46■□□□□ 0.23
GPC4O75487 CAND2-206ENST00000626378 333 ntTSL 5 BASIC16.46■□□□□ 0.23
GPC4O75487 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC16.46■□□□□ 0.23
GPC4O75487 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
GPC4O75487 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
GPC4O75487 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
GPC4O75487 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
GPC4O75487 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
GPC4O75487 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
GPC4O75487 AL596257.1-201ENST00000641463 2694 ntBASIC16.46■□□□□ 0.23
GPC4O75487 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
GPC4O75487 AC006538.1-201ENST00000567905 1585 ntBASIC16.46■□□□□ 0.23
GPC4O75487 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
GPC4O75487 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
GPC4O75487 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC16.46■□□□□ 0.23
GPC4O75487 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC16.46■□□□□ 0.23
GPC4O75487 AL161772.1-201ENST00000610494 4412 ntBASIC16.46■□□□□ 0.22
GPC4O75487 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
GPC4O75487 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
GPC4O75487 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
GPC4O75487 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC16.45■□□□□ 0.22
GPC4O75487 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC16.45■□□□□ 0.22
GPC4O75487 AL671710.1-201ENST00000610245 2349 ntBASIC16.45■□□□□ 0.22
GPC4O75487 GCK-202ENST00000345378 2421 ntTSL 2 BASIC16.45■□□□□ 0.22
GPC4O75487 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC16.45■□□□□ 0.22
GPC4O75487 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
GPC4O75487 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
GPC4O75487 BEX3-201ENST00000361298 921 ntTSL 2 BASIC16.45■□□□□ 0.22
GPC4O75487 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
GPC4O75487 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
GPC4O75487 DDT-204ENST00000404092 805 ntTSL 3 BASIC16.45■□□□□ 0.22
GPC4O75487 HMGA1P7-201ENST00000406908 502 ntBASIC16.45■□□□□ 0.22
GPC4O75487 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
GPC4O75487 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
GPC4O75487 AL513480.1-201ENST00000451731 511 ntBASIC16.45■□□□□ 0.22
GPC4O75487 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC16.45■□□□□ 0.22
GPC4O75487 HS6ST1P1-201ENST00000481504 1234 ntBASIC16.45■□□□□ 0.22
GPC4O75487 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC16.45■□□□□ 0.22
GPC4O75487 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC16.45■□□□□ 0.22
GPC4O75487 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC16.45■□□□□ 0.22
GPC4O75487 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC16.45■□□□□ 0.22
GPC4O75487 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC16.45■□□□□ 0.22
GPC4O75487 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC16.45■□□□□ 0.22
GPC4O75487 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
GPC4O75487 SIGLEC29P-201ENST00000599873 1114 ntBASIC16.45■□□□□ 0.22
GPC4O75487 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC16.45■□□□□ 0.22
GPC4O75487 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC16.45■□□□□ 0.22
GPC4O75487 AL645728.2-201ENST00000641974 660 ntBASIC16.45■□□□□ 0.22
GPC4O75487 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
GPC4O75487 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
GPC4O75487 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
GPC4O75487 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC16.45■□□□□ 0.22
GPC4O75487 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
GPC4O75487 PAUPAR-201ENST00000630360 2965 ntBASIC16.45■□□□□ 0.22
GPC4O75487 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
GPC4O75487 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
GPC4O75487 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
GPC4O75487 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC16.45■□□□□ 0.22
GPC4O75487 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC16.45■□□□□ 0.22
GPC4O75487 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
GPC4O75487 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
GPC4O75487 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC16.45■□□□□ 0.22
GPC4O75487 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC16.45■□□□□ 0.22
GPC4O75487 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
GPC4O75487 KRT8P39-201ENST00000396270 1433 ntBASIC16.45■□□□□ 0.22
GPC4O75487 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
GPC4O75487 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC16.44■□□□□ 0.22
GPC4O75487 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
GPC4O75487 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
GPC4O75487 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
GPC4O75487 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
GPC4O75487 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
GPC4O75487 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
GPC4O75487 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
GPC4O75487 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
GPC4O75487 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC16.44■□□□□ 0.22
GPC4O75487 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
GPC4O75487 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
GPC4O75487 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
GPC4O75487 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
GPC4O75487 MIR574-201ENST00000385209 96 ntBASIC16.44■□□□□ 0.22
GPC4O75487 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC16.44■□□□□ 0.22
GPC4O75487 KRT18P3-201ENST00000451602 1288 ntBASIC16.44■□□□□ 0.22
GPC4O75487 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC16.44■□□□□ 0.22
GPC4O75487 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC16.44■□□□□ 0.22
GPC4O75487 RPL28-209ENST00000560055 670 ntTSL 3 BASIC16.44■□□□□ 0.22
GPC4O75487 AL031432.2-201ENST00000566714 459 ntBASIC16.44■□□□□ 0.22
GPC4O75487 AL928711.1-201ENST00000570165 459 ntBASIC16.44■□□□□ 0.22
GPC4O75487 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC16.44■□□□□ 0.22
GPC4O75487 AC023141.13-201ENST00000604991 943 ntBASIC16.44■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 57.8 ms