Protein–RNA interactions for Protein: O60294

LCMT2, tRNA wybutosine-synthesizing protein 4, humanhuman

Known RBP Predictions only

Length 686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT2O60294 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC15.64■□□□□ 0.09
LCMT2O60294 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC15.64■□□□□ 0.09
LCMT2O60294 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LCMT2O60294 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC15.64■□□□□ 0.09
LCMT2O60294 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC15.64■□□□□ 0.09
LCMT2O60294 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
LCMT2O60294 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LCMT2O60294 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
LCMT2O60294 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC15.64■□□□□ 0.09
LCMT2O60294 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
LCMT2O60294 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
LCMT2O60294 AC098859.1-201ENST00000502915 1238 ntBASIC15.64■□□□□ 0.09
LCMT2O60294 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
LCMT2O60294 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC15.64■□□□□ 0.09
LCMT2O60294 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC15.64■□□□□ 0.09
LCMT2O60294 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LCMT2O60294 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC15.64■□□□□ 0.09
LCMT2O60294 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC15.64■□□□□ 0.09
LCMT2O60294 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
LCMT2O60294 SNHG9-202ENST00000564014 471 ntBASIC15.64■□□□□ 0.09
LCMT2O60294 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
LCMT2O60294 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC15.64■□□□□ 0.09
LCMT2O60294 AC006538.3-201ENST00000612495 578 ntBASIC15.64■□□□□ 0.09
LCMT2O60294 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
LCMT2O60294 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC15.64■□□□□ 0.09
LCMT2O60294 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
LCMT2O60294 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC15.64■□□□□ 0.09
LCMT2O60294 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC15.64■□□□□ 0.09
LCMT2O60294 FRMD6-AS1-201ENST00000617151 2229 ntBASIC15.64■□□□□ 0.09
LCMT2O60294 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
LCMT2O60294 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LCMT2O60294 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC15.64■□□□□ 0.09
LCMT2O60294 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LCMT2O60294 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC15.64■□□□□ 0.09
LCMT2O60294 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LCMT2O60294 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC15.64■□□□□ 0.09
LCMT2O60294 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC15.64■□□□□ 0.09
LCMT2O60294 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC15.63■□□□□ 0.09
LCMT2O60294 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
LCMT2O60294 PGR-209ENST00000617858 2816 ntTSL 5 BASIC15.63■□□□□ 0.09
LCMT2O60294 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
LCMT2O60294 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC15.63■□□□□ 0.09
LCMT2O60294 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
LCMT2O60294 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
LCMT2O60294 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
LCMT2O60294 MTHFR-217ENST00000641820 1569 ntBASIC15.63■□□□□ 0.09
LCMT2O60294 AC046158.3-201ENST00000624947 2558 ntBASIC15.63■□□□□ 0.09
LCMT2O60294 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC15.63■□□□□ 0.09
LCMT2O60294 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
LCMT2O60294 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
LCMT2O60294 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
LCMT2O60294 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC15.63■□□□□ 0.09
LCMT2O60294 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
LCMT2O60294 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
LCMT2O60294 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC15.63■□□□□ 0.09
LCMT2O60294 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC15.63■□□□□ 0.09
LCMT2O60294 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC15.63■□□□□ 0.09
LCMT2O60294 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC15.63■□□□□ 0.09
LCMT2O60294 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
LCMT2O60294 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC15.63■□□□□ 0.09
LCMT2O60294 AC027612.4-201ENST00000605371 583 ntBASIC15.63■□□□□ 0.09
LCMT2O60294 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
LCMT2O60294 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
LCMT2O60294 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
LCMT2O60294 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC15.63■□□□□ 0.09
LCMT2O60294 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
LCMT2O60294 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC15.63■□□□□ 0.09
LCMT2O60294 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
LCMT2O60294 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
LCMT2O60294 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
LCMT2O60294 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
LCMT2O60294 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
LCMT2O60294 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
LCMT2O60294 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
LCMT2O60294 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
LCMT2O60294 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
LCMT2O60294 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC15.63■□□□□ 0.09
LCMT2O60294 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
LCMT2O60294 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
LCMT2O60294 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
LCMT2O60294 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
LCMT2O60294 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
LCMT2O60294 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
LCMT2O60294 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
LCMT2O60294 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC15.62■□□□□ 0.09
LCMT2O60294 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
LCMT2O60294 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
LCMT2O60294 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC15.62■□□□□ 0.09
LCMT2O60294 PP14571-201ENST00000404327 934 ntTSL 2 BASIC15.62■□□□□ 0.09
LCMT2O60294 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
LCMT2O60294 GPS2P2-201ENST00000430745 888 ntBASIC15.62■□□□□ 0.09
LCMT2O60294 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC15.62■□□□□ 0.09
LCMT2O60294 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC15.62■□□□□ 0.09
LCMT2O60294 TSFM-210ENST00000550559 897 ntTSL 5 BASIC15.62■□□□□ 0.09
LCMT2O60294 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
LCMT2O60294 AP001160.2-201ENST00000596071 487 ntBASIC15.62■□□□□ 0.09
LCMT2O60294 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC15.62■□□□□ 0.09
LCMT2O60294 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC15.62■□□□□ 0.09
LCMT2O60294 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
LCMT2O60294 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms