Protein–RNA interactions for Protein: O43734

TRAF3IP2, Adapter protein CIKS, humanhuman

Predicted RBP Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2O43734 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRAF3IP2O43734 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC14.57□□□□□ -0.08
TRAF3IP2O43734 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRAF3IP2O43734 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRAF3IP2O43734 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRAF3IP2O43734 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRAF3IP2O43734 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRAF3IP2O43734 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
TRAF3IP2O43734 AC243562.1-201ENST00000560672 389 ntBASIC14.57□□□□□ -0.08
TRAF3IP2O43734 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC14.57□□□□□ -0.08
TRAF3IP2O43734 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC14.57□□□□□ -0.08
TRAF3IP2O43734 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC14.57□□□□□ -0.08
TRAF3IP2O43734 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC14.57□□□□□ -0.08
TRAF3IP2O43734 FHL2-212ENST00000607522 759 ntTSL 2 BASIC14.57□□□□□ -0.08
TRAF3IP2O43734 AC026120.1-201ENST00000611536 926 ntBASIC14.57□□□□□ -0.08
TRAF3IP2O43734 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC14.57□□□□□ -0.08
TRAF3IP2O43734 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC14.57□□□□□ -0.08
TRAF3IP2O43734 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRAF3IP2O43734 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
TRAF3IP2O43734 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC14.57□□□□□ -0.08
TRAF3IP2O43734 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
TRAF3IP2O43734 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRAF3IP2O43734 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
TRAF3IP2O43734 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
TRAF3IP2O43734 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRAF3IP2O43734 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRAF3IP2O43734 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TRAF3IP2O43734 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC14.57□□□□□ -0.08
TRAF3IP2O43734 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC14.57□□□□□ -0.08
TRAF3IP2O43734 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC14.57□□□□□ -0.08
TRAF3IP2O43734 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
TRAF3IP2O43734 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRAF3IP2O43734 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
TRAF3IP2O43734 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC14.57□□□□□ -0.08
TRAF3IP2O43734 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC14.57□□□□□ -0.08
TRAF3IP2O43734 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TRAF3IP2O43734 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC14.56□□□□□ -0.08
TRAF3IP2O43734 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAF3IP2O43734 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
TRAF3IP2O43734 AL589702.1-201ENST00000641229 1509 ntBASIC14.56□□□□□ -0.08
TRAF3IP2O43734 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TRAF3IP2O43734 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TRAF3IP2O43734 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
TRAF3IP2O43734 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAF3IP2O43734 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC14.56□□□□□ -0.08
TRAF3IP2O43734 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
TRAF3IP2O43734 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
TRAF3IP2O43734 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAF3IP2O43734 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
TRAF3IP2O43734 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAF3IP2O43734 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TRAF3IP2O43734 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAF3IP2O43734 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAF3IP2O43734 BX842568.4-201ENST00000421222 227 ntBASIC14.56□□□□□ -0.08
TRAF3IP2O43734 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC14.56□□□□□ -0.08
TRAF3IP2O43734 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC14.56□□□□□ -0.08
TRAF3IP2O43734 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC14.56□□□□□ -0.08
TRAF3IP2O43734 KRT8P48-201ENST00000515599 1220 ntBASIC14.56□□□□□ -0.08
TRAF3IP2O43734 AC105233.2-201ENST00000523697 349 ntBASIC14.56□□□□□ -0.08
TRAF3IP2O43734 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC14.56□□□□□ -0.08
TRAF3IP2O43734 AF228730.5-201ENST00000530288 346 ntBASIC14.56□□□□□ -0.08
TRAF3IP2O43734 CALM1-205ENST00000553542 877 ntTSL 5 BASIC14.56□□□□□ -0.08
TRAF3IP2O43734 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC14.56□□□□□ -0.08
TRAF3IP2O43734 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC14.56□□□□□ -0.08
TRAF3IP2O43734 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC14.56□□□□□ -0.08
TRAF3IP2O43734 AC027307.2-201ENST00000591252 911 ntBASIC14.56□□□□□ -0.08
TRAF3IP2O43734 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC14.56□□□□□ -0.08
TRAF3IP2O43734 AC008267.7-201ENST00000624570 1194 ntBASIC14.56□□□□□ -0.08
TRAF3IP2O43734 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAF3IP2O43734 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAF3IP2O43734 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TRAF3IP2O43734 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TRAF3IP2O43734 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAF3IP2O43734 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
TRAF3IP2O43734 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TRAF3IP2O43734 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAF3IP2O43734 ELL2P1-201ENST00000413990 1906 ntBASIC14.56□□□□□ -0.08
TRAF3IP2O43734 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAF3IP2O43734 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAF3IP2O43734 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC14.56□□□□□ -0.08
TRAF3IP2O43734 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAF3IP2O43734 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC14.56□□□□□ -0.08
TRAF3IP2O43734 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAF3IP2O43734 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC14.56□□□□□ -0.08
TRAF3IP2O43734 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAF3IP2O43734 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAF3IP2O43734 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC14.56□□□□□ -0.08
TRAF3IP2O43734 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAF3IP2O43734 FOXO1B-201ENST00000504678 1527 ntBASIC14.56□□□□□ -0.08
TRAF3IP2O43734 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
TRAF3IP2O43734 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC14.55□□□□□ -0.08
TRAF3IP2O43734 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC14.55□□□□□ -0.08
TRAF3IP2O43734 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC14.55□□□□□ -0.08
TRAF3IP2O43734 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC14.55□□□□□ -0.08
TRAF3IP2O43734 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRAF3IP2O43734 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC14.55□□□□□ -0.08
TRAF3IP2O43734 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
TRAF3IP2O43734 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRAF3IP2O43734 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRAF3IP2O43734 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC14.55□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms