Protein–RNA interactions for Protein: O43633

CHMP2A, Charged multivesicular body protein 2a, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2AO43633 OVCH1-AS1-204ENST00000641955 5529 ntBASIC18.38■□□□□ 0.53
CHMP2AO43633 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC18.38■□□□□ 0.53
CHMP2AO43633 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CHMP2AO43633 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CHMP2AO43633 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CHMP2AO43633 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC18.38■□□□□ 0.53
CHMP2AO43633 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC18.38■□□□□ 0.53
CHMP2AO43633 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CHMP2AO43633 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC18.38■□□□□ 0.53
CHMP2AO43633 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC18.37■□□□□ 0.53
CHMP2AO43633 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CHMP2AO43633 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC18.37■□□□□ 0.53
CHMP2AO43633 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CHMP2AO43633 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CHMP2AO43633 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CHMP2AO43633 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CHMP2AO43633 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CHMP2AO43633 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
CHMP2AO43633 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
CHMP2AO43633 FAM220BP-201ENST00000377689 816 ntBASIC18.37■□□□□ 0.53
CHMP2AO43633 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC18.37■□□□□ 0.53
CHMP2AO43633 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC18.37■□□□□ 0.53
CHMP2AO43633 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC18.37■□□□□ 0.53
CHMP2AO43633 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CHMP2AO43633 DUX4L27-201ENST00000554796 1261 ntBASIC18.37■□□□□ 0.53
CHMP2AO43633 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CHMP2AO43633 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
CHMP2AO43633 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CHMP2AO43633 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC18.37■□□□□ 0.53
CHMP2AO43633 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CHMP2AO43633 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CHMP2AO43633 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC18.37■□□□□ 0.53
CHMP2AO43633 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC18.37■□□□□ 0.53
CHMP2AO43633 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CHMP2AO43633 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CHMP2AO43633 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC18.36■□□□□ 0.53
CHMP2AO43633 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
CHMP2AO43633 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CHMP2AO43633 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CHMP2AO43633 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CHMP2AO43633 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
CHMP2AO43633 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CHMP2AO43633 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CHMP2AO43633 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
CHMP2AO43633 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
CHMP2AO43633 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CHMP2AO43633 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CHMP2AO43633 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
CHMP2AO43633 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CHMP2AO43633 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CHMP2AO43633 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
CHMP2AO43633 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CHMP2AO43633 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CHMP2AO43633 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
CHMP2AO43633 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC18.36■□□□□ 0.53
CHMP2AO43633 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CHMP2AO43633 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC18.36■□□□□ 0.53
CHMP2AO43633 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC18.36■□□□□ 0.53
CHMP2AO43633 KLF2P3-201ENST00000451977 1087 ntBASIC18.36■□□□□ 0.53
CHMP2AO43633 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC18.36■□□□□ 0.53
CHMP2AO43633 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC18.36■□□□□ 0.53
CHMP2AO43633 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CHMP2AO43633 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC18.36■□□□□ 0.53
CHMP2AO43633 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC18.36■□□□□ 0.53
CHMP2AO43633 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CHMP2AO43633 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC18.36■□□□□ 0.53
CHMP2AO43633 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC18.36■□□□□ 0.53
CHMP2AO43633 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CHMP2AO43633 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CHMP2AO43633 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
CHMP2AO43633 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
CHMP2AO43633 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
CHMP2AO43633 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC18.36■□□□□ 0.53
CHMP2AO43633 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
CHMP2AO43633 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
CHMP2AO43633 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CHMP2AO43633 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC18.35■□□□□ 0.53
CHMP2AO43633 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CHMP2AO43633 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
CHMP2AO43633 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CHMP2AO43633 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC18.35■□□□□ 0.53
CHMP2AO43633 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC18.35■□□□□ 0.53
CHMP2AO43633 U82695.1-201ENST00000635752 1889 ntBASIC18.35■□□□□ 0.53
CHMP2AO43633 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CHMP2AO43633 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CHMP2AO43633 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
CHMP2AO43633 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC18.35■□□□□ 0.53
CHMP2AO43633 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC18.35■□□□□ 0.53
CHMP2AO43633 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC18.35■□□□□ 0.53
CHMP2AO43633 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC18.35■□□□□ 0.53
CHMP2AO43633 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
CHMP2AO43633 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CHMP2AO43633 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CHMP2AO43633 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
CHMP2AO43633 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC18.35■□□□□ 0.53
CHMP2AO43633 POU5F1P6-201ENST00000466990 990 ntBASIC18.35■□□□□ 0.53
CHMP2AO43633 AC067863.1-201ENST00000494933 530 ntBASIC18.35■□□□□ 0.53
CHMP2AO43633 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC18.35■□□□□ 0.53
CHMP2AO43633 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC18.35■□□□□ 0.53
CHMP2AO43633 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC18.35■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 56.9 ms