Protein–RNA interactions for Protein: O15050

TRANK1, TPR and ankyrin repeat-containing protein 1, humanhuman

Predictions only

Length 2,925 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRANK1O15050 UPF3AP2-201ENST00000457924 1132 ntBASIC16.82■□□□□ 0.28
TRANK1O15050 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC16.82■□□□□ 0.28
TRANK1O15050 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TRANK1O15050 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC16.82■□□□□ 0.28
TRANK1O15050 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRANK1O15050 FAAP24-204ENST00000590179 784 ntTSL 2 BASIC16.82■□□□□ 0.28
TRANK1O15050 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRANK1O15050 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
TRANK1O15050 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRANK1O15050 AL390961.4-201ENST00000623958 2535 ntBASIC16.82■□□□□ 0.28
TRANK1O15050 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRANK1O15050 BEX2-201ENST00000372674 668 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
TRANK1O15050 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
TRANK1O15050 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRANK1O15050 FTLP1-201ENST00000449155 526 ntBASIC16.82■□□□□ 0.28
TRANK1O15050 AC245100.5-201ENST00000452108 331 ntBASIC16.82■□□□□ 0.28
TRANK1O15050 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC16.82■□□□□ 0.28
TRANK1O15050 FANCA-204ENST00000534992 1088 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TRANK1O15050 Metazoa_SRP.69-201ENST00000615730 281 ntBASIC16.82■□□□□ 0.28
TRANK1O15050 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
TRANK1O15050 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC16.82■□□□□ 0.28
TRANK1O15050 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
TRANK1O15050 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TRANK1O15050 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRANK1O15050 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRANK1O15050 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
TRANK1O15050 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC16.82■□□□□ 0.28
TRANK1O15050 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC16.82■□□□□ 0.28
TRANK1O15050 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TRANK1O15050 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRANK1O15050 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRANK1O15050 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TRANK1O15050 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
TRANK1O15050 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
TRANK1O15050 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TRANK1O15050 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
TRANK1O15050 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TRANK1O15050 AC020763.1-201ENST00000567186 551 ntTSL 4 BASIC16.81■□□□□ 0.28
TRANK1O15050 AC093813.1-201ENST00000605066 256 ntBASIC16.81■□□□□ 0.28
TRANK1O15050 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TRANK1O15050 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRANK1O15050 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRANK1O15050 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRANK1O15050 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRANK1O15050 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRANK1O15050 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRANK1O15050 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TRANK1O15050 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRANK1O15050 NKAIN1P1-201ENST00000435754 582 ntBASIC16.81■□□□□ 0.28
TRANK1O15050 AL139246.4-201ENST00000442305 514 ntTSL 3 BASIC16.81■□□□□ 0.28
TRANK1O15050 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRANK1O15050 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC16.81■□□□□ 0.28
TRANK1O15050 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC16.81■□□□□ 0.28
TRANK1O15050 AC120498.9-201ENST00000339021 3867 ntBASIC16.81■□□□□ 0.28
TRANK1O15050 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TRANK1O15050 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRANK1O15050 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
TRANK1O15050 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
TRANK1O15050 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC16.81■□□□□ 0.28
TRANK1O15050 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC16.81■□□□□ 0.28
TRANK1O15050 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRANK1O15050 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRANK1O15050 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC16.81■□□□□ 0.28
TRANK1O15050 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC16.8■□□□□ 0.28
TRANK1O15050 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC16.8■□□□□ 0.28
TRANK1O15050 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRANK1O15050 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC16.8■□□□□ 0.28
TRANK1O15050 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC16.8■□□□□ 0.28
TRANK1O15050 NDUFV2P1-201ENST00000596415 907 ntBASIC16.8■□□□□ 0.28
TRANK1O15050 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC16.8■□□□□ 0.28
TRANK1O15050 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC16.8■□□□□ 0.28
TRANK1O15050 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
TRANK1O15050 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
TRANK1O15050 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRANK1O15050 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRANK1O15050 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC16.8■□□□□ 0.28
TRANK1O15050 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRANK1O15050 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
TRANK1O15050 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC16.8■□□□□ 0.28
TRANK1O15050 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRANK1O15050 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRANK1O15050 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
TRANK1O15050 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRANK1O15050 MIR5572-201ENST00000583188 137 ntBASIC16.8■□□□□ 0.28
TRANK1O15050 AC105105.3-201ENST00000585470 646 ntTSL 5 BASIC16.8■□□□□ 0.28
TRANK1O15050 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC16.8■□□□□ 0.28
TRANK1O15050 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC16.8■□□□□ 0.28
TRANK1O15050 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
TRANK1O15050 DNAJC17-212ENST00000627802 428 ntTSL 4 BASIC16.8■□□□□ 0.28
TRANK1O15050 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
TRANK1O15050 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
TRANK1O15050 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRANK1O15050 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TRANK1O15050 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC16.8■□□□□ 0.28
TRANK1O15050 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRANK1O15050 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRANK1O15050 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
TRANK1O15050 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
TRANK1O15050 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
TRANK1O15050 AC005622.1-201ENST00000636801 1703 ntBASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms