Protein–RNA interactions for Protein: O00526

UPK2, Uroplakin-2, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK2O00526 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
UPK2O00526 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC13.14□□□□□ -0.31
UPK2O00526 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
UPK2O00526 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
UPK2O00526 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC13.14□□□□□ -0.31
UPK2O00526 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
UPK2O00526 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC13.14□□□□□ -0.31
UPK2O00526 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
UPK2O00526 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
UPK2O00526 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
UPK2O00526 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
UPK2O00526 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
UPK2O00526 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
UPK2O00526 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
UPK2O00526 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
UPK2O00526 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
UPK2O00526 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
UPK2O00526 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
UPK2O00526 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
UPK2O00526 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC13.14□□□□□ -0.31
UPK2O00526 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC13.14□□□□□ -0.31
UPK2O00526 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC13.14□□□□□ -0.31
UPK2O00526 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC13.14□□□□□ -0.31
UPK2O00526 CRYGEP-201ENST00000412192 528 ntBASIC13.14□□□□□ -0.31
UPK2O00526 AL031284.1-201ENST00000419297 478 ntBASIC13.14□□□□□ -0.31
UPK2O00526 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC13.14□□□□□ -0.31
UPK2O00526 AC098831.1-202ENST00000438821 336 ntBASIC13.14□□□□□ -0.31
UPK2O00526 PPIE-208ENST00000470213 927 ntTSL 3 BASIC13.14□□□□□ -0.31
UPK2O00526 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
UPK2O00526 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC13.14□□□□□ -0.31
UPK2O00526 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
UPK2O00526 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC13.14□□□□□ -0.31
UPK2O00526 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
UPK2O00526 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
UPK2O00526 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC13.14□□□□□ -0.31
UPK2O00526 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC13.14□□□□□ -0.31
UPK2O00526 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
UPK2O00526 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC13.14□□□□□ -0.31
UPK2O00526 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC13.14□□□□□ -0.31
UPK2O00526 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
UPK2O00526 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
UPK2O00526 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
UPK2O00526 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
UPK2O00526 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
UPK2O00526 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC13.14□□□□□ -0.31
UPK2O00526 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC13.14□□□□□ -0.31
UPK2O00526 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC13.14□□□□□ -0.31
UPK2O00526 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
UPK2O00526 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
UPK2O00526 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
UPK2O00526 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
UPK2O00526 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC13.13□□□□□ -0.31
UPK2O00526 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
UPK2O00526 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
UPK2O00526 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC13.13□□□□□ -0.31
UPK2O00526 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC13.13□□□□□ -0.31
UPK2O00526 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
UPK2O00526 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
UPK2O00526 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
UPK2O00526 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
UPK2O00526 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
UPK2O00526 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
UPK2O00526 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
UPK2O00526 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
UPK2O00526 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
UPK2O00526 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC13.13□□□□□ -0.31
UPK2O00526 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
UPK2O00526 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
UPK2O00526 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
UPK2O00526 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
UPK2O00526 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
UPK2O00526 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC13.13□□□□□ -0.31
UPK2O00526 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC13.13□□□□□ -0.31
UPK2O00526 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
UPK2O00526 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC13.13□□□□□ -0.31
UPK2O00526 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
UPK2O00526 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
UPK2O00526 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC13.13□□□□□ -0.31
UPK2O00526 FAAHP1-202ENST00000446499 1238 ntBASIC13.13□□□□□ -0.31
UPK2O00526 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC13.13□□□□□ -0.31
UPK2O00526 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC13.13□□□□□ -0.31
UPK2O00526 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC13.13□□□□□ -0.31
UPK2O00526 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC13.13□□□□□ -0.31
UPK2O00526 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC13.13□□□□□ -0.31
UPK2O00526 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC13.13□□□□□ -0.31
UPK2O00526 RN7SL510P-201ENST00000581311 263 ntBASIC13.13□□□□□ -0.31
UPK2O00526 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
UPK2O00526 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
UPK2O00526 AL049840.3-201ENST00000602669 611 ntBASIC13.13□□□□□ -0.31
UPK2O00526 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
UPK2O00526 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC13.13□□□□□ -0.31
UPK2O00526 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC13.13□□□□□ -0.31
UPK2O00526 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
UPK2O00526 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
UPK2O00526 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC13.13□□□□□ -0.31
UPK2O00526 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
UPK2O00526 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
UPK2O00526 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
UPK2O00526 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC13.13□□□□□ -0.31
UPK2O00526 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms