Protein–RNA interactions for Protein: O00203

AP3B1, AP-3 complex subunit beta-1, humanhuman

Predictions only

Length 1,094 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1O00203 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
AP3B1O00203 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC16.55■□□□□ 0.24
AP3B1O00203 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC16.55■□□□□ 0.24
AP3B1O00203 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC16.55■□□□□ 0.24
AP3B1O00203 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC16.55■□□□□ 0.24
AP3B1O00203 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC16.55■□□□□ 0.24
AP3B1O00203 CD7-202ENST00000578509 925 ntTSL 3 BASIC16.55■□□□□ 0.24
AP3B1O00203 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
AP3B1O00203 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
AP3B1O00203 AC004877.2-201ENST00000623941 599 ntBASIC16.55■□□□□ 0.24
AP3B1O00203 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC16.55■□□□□ 0.24
AP3B1O00203 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC16.55■□□□□ 0.24
AP3B1O00203 AC069224.1-201ENST00000566372 1715 ntBASIC16.55■□□□□ 0.24
AP3B1O00203 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC16.55■□□□□ 0.24
AP3B1O00203 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
AP3B1O00203 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
AP3B1O00203 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
AP3B1O00203 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC16.55■□□□□ 0.24
AP3B1O00203 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
AP3B1O00203 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC16.55■□□□□ 0.24
AP3B1O00203 LINC02447-202ENST00000501888 2146 ntBASIC16.55■□□□□ 0.24
AP3B1O00203 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC16.55■□□□□ 0.24
AP3B1O00203 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC16.55■□□□□ 0.24
AP3B1O00203 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
AP3B1O00203 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
AP3B1O00203 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
AP3B1O00203 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
AP3B1O00203 AL162727.3-201ENST00000635661 2787 ntBASIC16.55■□□□□ 0.24
AP3B1O00203 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
AP3B1O00203 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
AP3B1O00203 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
AP3B1O00203 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
AP3B1O00203 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
AP3B1O00203 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
AP3B1O00203 AC025580.3-201ENST00000617932 1424 ntBASIC16.54■□□□□ 0.24
AP3B1O00203 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC16.54■□□□□ 0.24
AP3B1O00203 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
AP3B1O00203 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
AP3B1O00203 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC16.54■□□□□ 0.24
AP3B1O00203 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
AP3B1O00203 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC16.54■□□□□ 0.24
AP3B1O00203 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC16.54■□□□□ 0.24
AP3B1O00203 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC16.54■□□□□ 0.24
AP3B1O00203 BCAR1-209ENST00000546196 1340 ntBASIC16.54■□□□□ 0.24
AP3B1O00203 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
AP3B1O00203 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
AP3B1O00203 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
AP3B1O00203 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
AP3B1O00203 BEX3-201ENST00000361298 921 ntTSL 2 BASIC16.54■□□□□ 0.24
AP3B1O00203 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC16.54■□□□□ 0.24
AP3B1O00203 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC16.54■□□□□ 0.24
AP3B1O00203 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC16.54■□□□□ 0.24
AP3B1O00203 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
AP3B1O00203 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC16.54■□□□□ 0.24
AP3B1O00203 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
AP3B1O00203 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC16.54■□□□□ 0.24
AP3B1O00203 AC064836.3-201ENST00000607928 673 ntBASIC16.54■□□□□ 0.24
AP3B1O00203 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
AP3B1O00203 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC16.54■□□□□ 0.24
AP3B1O00203 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
AP3B1O00203 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC16.54■□□□□ 0.24
AP3B1O00203 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
AP3B1O00203 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
AP3B1O00203 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
AP3B1O00203 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
AP3B1O00203 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
AP3B1O00203 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC16.54■□□□□ 0.24
AP3B1O00203 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
AP3B1O00203 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
AP3B1O00203 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC16.53■□□□□ 0.24
AP3B1O00203 AC104109.2-201ENST00000602919 1418 ntBASIC16.53■□□□□ 0.24
AP3B1O00203 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
AP3B1O00203 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
AP3B1O00203 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC16.53■□□□□ 0.24
AP3B1O00203 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
AP3B1O00203 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC16.53■□□□□ 0.24
AP3B1O00203 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC16.53■□□□□ 0.24
AP3B1O00203 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
AP3B1O00203 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
AP3B1O00203 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
AP3B1O00203 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
AP3B1O00203 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
AP3B1O00203 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
AP3B1O00203 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
AP3B1O00203 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
AP3B1O00203 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC16.53■□□□□ 0.24
AP3B1O00203 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
AP3B1O00203 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
AP3B1O00203 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
AP3B1O00203 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC16.53■□□□□ 0.24
AP3B1O00203 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
AP3B1O00203 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.53■□□□□ 0.24
AP3B1O00203 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC16.53■□□□□ 0.24
AP3B1O00203 AC002056.1-201ENST00000395613 760 ntBASIC16.53■□□□□ 0.24
AP3B1O00203 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
AP3B1O00203 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC16.53■□□□□ 0.24
AP3B1O00203 SMN2-210ENST00000511812 867 ntTSL 2 BASIC16.53■□□□□ 0.24
AP3B1O00203 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
AP3B1O00203 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
AP3B1O00203 AC034105.1-201ENST00000563488 319 ntBASIC16.53■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 63.1 ms