Protein–RNA interactions for Protein: A6NDA9

LRIT2, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 2, humanhuman

Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT2A6NDA9 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LRIT2A6NDA9 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC15.54■□□□□ 0.08
LRIT2A6NDA9 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
LRIT2A6NDA9 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
LRIT2A6NDA9 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LRIT2A6NDA9 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LRIT2A6NDA9 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC15.54■□□□□ 0.08
LRIT2A6NDA9 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LRIT2A6NDA9 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC15.54■□□□□ 0.08
LRIT2A6NDA9 PP14571-201ENST00000404327 934 ntTSL 2 BASIC15.54■□□□□ 0.08
LRIT2A6NDA9 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC15.54■□□□□ 0.08
LRIT2A6NDA9 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
LRIT2A6NDA9 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC15.54■□□□□ 0.08
LRIT2A6NDA9 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC15.54■□□□□ 0.08
LRIT2A6NDA9 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC15.54■□□□□ 0.08
LRIT2A6NDA9 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC15.54■□□□□ 0.08
LRIT2A6NDA9 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC15.54■□□□□ 0.08
LRIT2A6NDA9 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC15.54■□□□□ 0.08
LRIT2A6NDA9 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC15.54■□□□□ 0.08
LRIT2A6NDA9 AC023511.2-201ENST00000618803 211 ntBASIC15.54■□□□□ 0.08
LRIT2A6NDA9 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
LRIT2A6NDA9 BLK-205ENST00000529894 2017 ntTSL 5 BASIC15.54■□□□□ 0.08
LRIT2A6NDA9 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
LRIT2A6NDA9 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
LRIT2A6NDA9 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
LRIT2A6NDA9 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC15.54■□□□□ 0.08
LRIT2A6NDA9 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC15.54■□□□□ 0.08
LRIT2A6NDA9 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC15.54■□□□□ 0.08
LRIT2A6NDA9 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
LRIT2A6NDA9 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LRIT2A6NDA9 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC15.54■□□□□ 0.08
LRIT2A6NDA9 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LRIT2A6NDA9 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
LRIT2A6NDA9 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
LRIT2A6NDA9 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
LRIT2A6NDA9 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC15.53■□□□□ 0.08
LRIT2A6NDA9 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC15.53■□□□□ 0.08
LRIT2A6NDA9 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
LRIT2A6NDA9 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
LRIT2A6NDA9 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
LRIT2A6NDA9 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
LRIT2A6NDA9 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC15.53■□□□□ 0.08
LRIT2A6NDA9 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC15.53■□□□□ 0.08
LRIT2A6NDA9 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
LRIT2A6NDA9 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
LRIT2A6NDA9 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
LRIT2A6NDA9 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC15.53■□□□□ 0.08
LRIT2A6NDA9 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC15.53■□□□□ 0.08
LRIT2A6NDA9 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
LRIT2A6NDA9 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC15.53■□□□□ 0.08
LRIT2A6NDA9 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC15.53■□□□□ 0.08
LRIT2A6NDA9 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC15.53■□□□□ 0.08
LRIT2A6NDA9 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC15.53■□□□□ 0.08
LRIT2A6NDA9 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC15.53■□□□□ 0.08
LRIT2A6NDA9 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
LRIT2A6NDA9 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
LRIT2A6NDA9 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
LRIT2A6NDA9 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC15.53■□□□□ 0.08
LRIT2A6NDA9 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
LRIT2A6NDA9 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
LRIT2A6NDA9 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC15.53■□□□□ 0.08
LRIT2A6NDA9 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
LRIT2A6NDA9 PGR-209ENST00000617858 2816 ntTSL 5 BASIC15.53■□□□□ 0.08
LRIT2A6NDA9 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
LRIT2A6NDA9 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
LRIT2A6NDA9 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC15.52■□□□□ 0.08
LRIT2A6NDA9 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.08
LRIT2A6NDA9 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
LRIT2A6NDA9 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC15.52■□□□□ 0.08
LRIT2A6NDA9 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC15.52■□□□□ 0.08
LRIT2A6NDA9 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
LRIT2A6NDA9 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
LRIT2A6NDA9 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
LRIT2A6NDA9 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
LRIT2A6NDA9 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
LRIT2A6NDA9 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
LRIT2A6NDA9 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
LRIT2A6NDA9 ACE-204ENST00000428043 5120 ntTSL 2 BASIC15.52■□□□□ 0.08
LRIT2A6NDA9 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
LRIT2A6NDA9 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC15.52■□□□□ 0.08
LRIT2A6NDA9 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
LRIT2A6NDA9 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
LRIT2A6NDA9 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC15.52■□□□□ 0.08
LRIT2A6NDA9 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
LRIT2A6NDA9 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
LRIT2A6NDA9 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC15.52■□□□□ 0.08
LRIT2A6NDA9 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
LRIT2A6NDA9 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
LRIT2A6NDA9 AC254562.1-201ENST00000417586 456 ntBASIC15.52■□□□□ 0.08
LRIT2A6NDA9 AC005237.2-201ENST00000434368 219 ntBASIC15.52■□□□□ 0.08
LRIT2A6NDA9 AP006288.1-201ENST00000446065 395 ntBASIC15.52■□□□□ 0.08
LRIT2A6NDA9 SLC25A39P2-201ENST00000537614 270 ntBASIC15.52■□□□□ 0.08
LRIT2A6NDA9 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC15.52■□□□□ 0.08
LRIT2A6NDA9 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC15.52■□□□□ 0.08
LRIT2A6NDA9 AC093520.2-201ENST00000561830 333 ntBASIC15.52■□□□□ 0.08
LRIT2A6NDA9 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC15.52■□□□□ 0.08
LRIT2A6NDA9 MIR4321-201ENST00000592276 80 ntBASIC15.52■□□□□ 0.08
LRIT2A6NDA9 AC004835.2-201ENST00000603762 682 ntBASIC15.52■□□□□ 0.08
LRIT2A6NDA9 AC134684.3-201ENST00000641758 218 ntBASIC15.52■□□□□ 0.08
LRIT2A6NDA9 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms