Protein–RNA interactions for Protein: A4FU28

CTAGE9, cTAGE family member 9, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTAGE9A4FU28 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CTAGE9A4FU28 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CTAGE9A4FU28 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CTAGE9A4FU28 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CTAGE9A4FU28 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CTAGE9A4FU28 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CTAGE9A4FU28 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC17.52■□□□□ 0.4
CTAGE9A4FU28 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
CTAGE9A4FU28 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CTAGE9A4FU28 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC17.52■□□□□ 0.4
CTAGE9A4FU28 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC17.52■□□□□ 0.4
CTAGE9A4FU28 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
CTAGE9A4FU28 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CTAGE9A4FU28 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CTAGE9A4FU28 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CTAGE9A4FU28 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CTAGE9A4FU28 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CTAGE9A4FU28 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC17.52■□□□□ 0.4
CTAGE9A4FU28 AC079776.2-201ENST00000641154 1609 ntBASIC17.52■□□□□ 0.4
CTAGE9A4FU28 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CTAGE9A4FU28 TLE1-202ENST00000376484 666 ntTSL 3 BASIC17.52■□□□□ 0.4
CTAGE9A4FU28 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CTAGE9A4FU28 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC17.52■□□□□ 0.4
CTAGE9A4FU28 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
CTAGE9A4FU28 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CTAGE9A4FU28 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
CTAGE9A4FU28 AC087388.1-201ENST00000571370 1112 ntBASIC17.52■□□□□ 0.4
CTAGE9A4FU28 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC17.52■□□□□ 0.4
CTAGE9A4FU28 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CTAGE9A4FU28 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
CTAGE9A4FU28 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
CTAGE9A4FU28 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.4
CTAGE9A4FU28 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
CTAGE9A4FU28 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CTAGE9A4FU28 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CTAGE9A4FU28 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC17.52■□□□□ 0.39
CTAGE9A4FU28 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC17.52■□□□□ 0.39
CTAGE9A4FU28 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
CTAGE9A4FU28 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
CTAGE9A4FU28 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC17.52■□□□□ 0.39
CTAGE9A4FU28 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CTAGE9A4FU28 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CTAGE9A4FU28 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CTAGE9A4FU28 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC17.51■□□□□ 0.39
CTAGE9A4FU28 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CTAGE9A4FU28 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CTAGE9A4FU28 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CTAGE9A4FU28 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC17.51■□□□□ 0.39
CTAGE9A4FU28 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC17.51■□□□□ 0.39
CTAGE9A4FU28 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CTAGE9A4FU28 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CTAGE9A4FU28 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CTAGE9A4FU28 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CTAGE9A4FU28 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
CTAGE9A4FU28 PGR-210ENST00000619228 3038 ntTSL 5 BASIC17.51■□□□□ 0.39
CTAGE9A4FU28 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC17.51■□□□□ 0.39
CTAGE9A4FU28 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CTAGE9A4FU28 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CTAGE9A4FU28 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CTAGE9A4FU28 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CTAGE9A4FU28 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CTAGE9A4FU28 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC17.51■□□□□ 0.39
CTAGE9A4FU28 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CTAGE9A4FU28 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CTAGE9A4FU28 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC17.51■□□□□ 0.39
CTAGE9A4FU28 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC17.51■□□□□ 0.39
CTAGE9A4FU28 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CTAGE9A4FU28 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC17.51■□□□□ 0.39
CTAGE9A4FU28 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC17.51■□□□□ 0.39
CTAGE9A4FU28 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC17.51■□□□□ 0.39
CTAGE9A4FU28 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC17.51■□□□□ 0.39
CTAGE9A4FU28 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC17.51■□□□□ 0.39
CTAGE9A4FU28 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC17.51■□□□□ 0.39
CTAGE9A4FU28 BNIP3P18-201ENST00000593976 575 ntBASIC17.51■□□□□ 0.39
CTAGE9A4FU28 AC020765.3-201ENST00000613051 740 ntBASIC17.51■□□□□ 0.39
CTAGE9A4FU28 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC17.51■□□□□ 0.39
CTAGE9A4FU28 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC17.51■□□□□ 0.39
CTAGE9A4FU28 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
CTAGE9A4FU28 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CTAGE9A4FU28 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CTAGE9A4FU28 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC17.51■□□□□ 0.39
CTAGE9A4FU28 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CTAGE9A4FU28 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CTAGE9A4FU28 AL592424.1-201ENST00000563624 1536 ntBASIC17.51■□□□□ 0.39
CTAGE9A4FU28 AC233702.3-201ENST00000578656 1387 ntBASIC17.51■□□□□ 0.39
CTAGE9A4FU28 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CTAGE9A4FU28 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CTAGE9A4FU28 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CTAGE9A4FU28 TPO-203ENST00000346956 2923 ntTSL 5 BASIC17.51■□□□□ 0.39
CTAGE9A4FU28 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CTAGE9A4FU28 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
CTAGE9A4FU28 GSN-206ENST00000394353 2311 ntTSL 2 BASIC17.5■□□□□ 0.39
CTAGE9A4FU28 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC17.5■□□□□ 0.39
CTAGE9A4FU28 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
CTAGE9A4FU28 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
CTAGE9A4FU28 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
CTAGE9A4FU28 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
CTAGE9A4FU28 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC17.5■□□□□ 0.39
CTAGE9A4FU28 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC17.5■□□□□ 0.39
CTAGE9A4FU28 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms