Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
NPIPA1Q9UND3 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
NPIPA1Q9UND3 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
NPIPA1Q9UND3 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NPIPA1Q9UND3 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
NPIPA1Q9UND3 BAD-202ENST00000394531 631 ntTSL 3 BASIC15.12■□□□□ 0.01
NPIPA1Q9UND3 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
NPIPA1Q9UND3 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC15.12■□□□□ 0.01
NPIPA1Q9UND3 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC15.12■□□□□ 0.01
NPIPA1Q9UND3 SPDYE14P-201ENST00000442619 822 ntBASIC15.12■□□□□ 0.01
NPIPA1Q9UND3 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC15.12■□□□□ 0.01
NPIPA1Q9UND3 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
NPIPA1Q9UND3 BAD-207ENST00000544785 525 ntTSL 3 BASIC15.12■□□□□ 0.01
NPIPA1Q9UND3 AQP6-203ENST00000551733 849 ntTSL 3 BASIC15.12■□□□□ 0.01
NPIPA1Q9UND3 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC15.12■□□□□ 0.01
NPIPA1Q9UND3 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NPIPA1Q9UND3 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC15.12■□□□□ 0.01
NPIPA1Q9UND3 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
NPIPA1Q9UND3 AJ011932.1-201ENST00000621707 465 ntBASIC15.12■□□□□ 0.01
NPIPA1Q9UND3 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
NPIPA1Q9UND3 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC15.12■□□□□ 0.01
NPIPA1Q9UND3 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
NPIPA1Q9UND3 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
NPIPA1Q9UND3 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
NPIPA1Q9UND3 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC15.12■□□□□ 0.01
NPIPA1Q9UND3 AL603756.1-201ENST00000606511 2163 ntBASIC15.12■□□□□ 0.01
NPIPA1Q9UND3 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC15.12■□□□□ 0.01
NPIPA1Q9UND3 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC15.12■□□□□ 0.01
NPIPA1Q9UND3 AC124067.4-201ENST00000519691 2379 ntBASIC15.12■□□□□ 0.01
NPIPA1Q9UND3 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
NPIPA1Q9UND3 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC15.12■□□□□ 0.01
NPIPA1Q9UND3 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
NPIPA1Q9UND3 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC15.12■□□□□ 0.01
NPIPA1Q9UND3 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
NPIPA1Q9UND3 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
NPIPA1Q9UND3 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
NPIPA1Q9UND3 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NPIPA1Q9UND3 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC15.11■□□□□ 0.01
NPIPA1Q9UND3 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC15.11■□□□□ 0.01
NPIPA1Q9UND3 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
NPIPA1Q9UND3 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
NPIPA1Q9UND3 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
NPIPA1Q9UND3 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC15.11■□□□□ 0.01
NPIPA1Q9UND3 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC15.11■□□□□ 0.01
NPIPA1Q9UND3 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
NPIPA1Q9UND3 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
NPIPA1Q9UND3 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
NPIPA1Q9UND3 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NPIPA1Q9UND3 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC15.11■□□□□ 0.01
NPIPA1Q9UND3 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC15.11■□□□□ 0.01
NPIPA1Q9UND3 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
NPIPA1Q9UND3 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
NPIPA1Q9UND3 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
NPIPA1Q9UND3 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NPIPA1Q9UND3 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NPIPA1Q9UND3 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
NPIPA1Q9UND3 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NPIPA1Q9UND3 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
NPIPA1Q9UND3 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
NPIPA1Q9UND3 HNRNPA1P40-201ENST00000426371 1278 ntBASIC15.11■□□□□ 0.01
NPIPA1Q9UND3 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC15.11■□□□□ 0.01
NPIPA1Q9UND3 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
NPIPA1Q9UND3 COX20P2-201ENST00000452636 358 ntBASIC15.11■□□□□ 0.01
NPIPA1Q9UND3 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC15.11■□□□□ 0.01
NPIPA1Q9UND3 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC15.11■□□□□ 0.01
NPIPA1Q9UND3 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC15.11■□□□□ 0.01
NPIPA1Q9UND3 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC15.11■□□□□ 0.01
NPIPA1Q9UND3 MIR3909-201ENST00000579518 119 ntBASIC15.11■□□□□ 0.01
NPIPA1Q9UND3 AC138761.1-201ENST00000584393 385 ntBASIC15.11■□□□□ 0.01
NPIPA1Q9UND3 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC15.11■□□□□ 0.01
NPIPA1Q9UND3 CYP2A7P1-201ENST00000595391 815 ntBASIC15.11■□□□□ 0.01
NPIPA1Q9UND3 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NPIPA1Q9UND3 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC15.11■□□□□ 0.01
NPIPA1Q9UND3 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NPIPA1Q9UND3 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC15.11■□□□□ 0.01
NPIPA1Q9UND3 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NPIPA1Q9UND3 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
NPIPA1Q9UND3 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NPIPA1Q9UND3 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NPIPA1Q9UND3 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
NPIPA1Q9UND3 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC15.11■□□□□ 0.01
NPIPA1Q9UND3 AC079328.2-201ENST00000561241 3354 ntBASIC15.11■□□□□ 0.01
NPIPA1Q9UND3 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NPIPA1Q9UND3 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NPIPA1Q9UND3 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
NPIPA1Q9UND3 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NPIPA1Q9UND3 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
NPIPA1Q9UND3 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
NPIPA1Q9UND3 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
NPIPA1Q9UND3 FO538757.1-201ENST00000623083 1397 ntBASIC15.11■□□□□ 0.01
NPIPA1Q9UND3 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC15.11■□□□□ 0.01
NPIPA1Q9UND3 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC15.11■□□□□ 0.01
NPIPA1Q9UND3 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
NPIPA1Q9UND3 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
NPIPA1Q9UND3 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
NPIPA1Q9UND3 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
NPIPA1Q9UND3 HLA-A-202ENST00000376806 1854 ntBASIC15.1■□□□□ 0.01
NPIPA1Q9UND3 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC15.1■□□□□ 0.01
NPIPA1Q9UND3 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
NPIPA1Q9UND3 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC15.1■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 54.5 ms