Protein–RNA interactions for Protein: Q9ULB4

CDH9, Cadherin-9, humanhuman

Predictions only

Length 789 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9Q9ULB4 AL139010.1-201ENST00000454878 894 ntBASIC17.23■□□□□ 0.35
CDH9Q9ULB4 LY6E-204ENST00000519546 971 ntTSL 2 BASIC17.23■□□□□ 0.35
CDH9Q9ULB4 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC17.23■□□□□ 0.35
CDH9Q9ULB4 PAM16-215ENST00000577031 548 ntTSL 4 BASIC17.23■□□□□ 0.35
CDH9Q9ULB4 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CDH9Q9ULB4 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC17.23■□□□□ 0.35
CDH9Q9ULB4 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CDH9Q9ULB4 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC17.23■□□□□ 0.35
CDH9Q9ULB4 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CDH9Q9ULB4 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CDH9Q9ULB4 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
CDH9Q9ULB4 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CDH9Q9ULB4 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CDH9Q9ULB4 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CDH9Q9ULB4 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CDH9Q9ULB4 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
CDH9Q9ULB4 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
CDH9Q9ULB4 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
CDH9Q9ULB4 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
CDH9Q9ULB4 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC17.22■□□□□ 0.35
CDH9Q9ULB4 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CDH9Q9ULB4 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CDH9Q9ULB4 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC17.22■□□□□ 0.35
CDH9Q9ULB4 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CDH9Q9ULB4 AC245100.5-201ENST00000452108 331 ntBASIC17.22■□□□□ 0.35
CDH9Q9ULB4 AL079307.3-201ENST00000556114 283 ntBASIC17.22■□□□□ 0.35
CDH9Q9ULB4 INO80C-206ENST00000586489 594 ntTSL 3 BASIC17.22■□□□□ 0.35
CDH9Q9ULB4 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC17.22■□□□□ 0.35
CDH9Q9ULB4 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
CDH9Q9ULB4 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC17.22■□□□□ 0.35
CDH9Q9ULB4 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
CDH9Q9ULB4 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC17.22■□□□□ 0.35
CDH9Q9ULB4 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CDH9Q9ULB4 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CDH9Q9ULB4 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CDH9Q9ULB4 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CDH9Q9ULB4 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CDH9Q9ULB4 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CDH9Q9ULB4 AC100757.3-201ENST00000622361 1406 ntBASIC17.21■□□□□ 0.35
CDH9Q9ULB4 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC17.21■□□□□ 0.35
CDH9Q9ULB4 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CDH9Q9ULB4 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC17.21■□□□□ 0.35
CDH9Q9ULB4 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
CDH9Q9ULB4 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CDH9Q9ULB4 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CDH9Q9ULB4 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC17.21■□□□□ 0.35
CDH9Q9ULB4 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
CDH9Q9ULB4 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CDH9Q9ULB4 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CDH9Q9ULB4 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC17.21■□□□□ 0.35
CDH9Q9ULB4 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC17.21■□□□□ 0.35
CDH9Q9ULB4 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC17.21■□□□□ 0.35
CDH9Q9ULB4 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC17.21■□□□□ 0.35
CDH9Q9ULB4 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CDH9Q9ULB4 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC17.21■□□□□ 0.35
CDH9Q9ULB4 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
CDH9Q9ULB4 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CDH9Q9ULB4 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CDH9Q9ULB4 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC17.21■□□□□ 0.35
CDH9Q9ULB4 INGX-202ENST00000489074 768 ntBASIC17.21■□□□□ 0.35
CDH9Q9ULB4 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC17.21■□□□□ 0.35
CDH9Q9ULB4 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC17.21■□□□□ 0.35
CDH9Q9ULB4 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC17.21■□□□□ 0.35
CDH9Q9ULB4 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
CDH9Q9ULB4 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC17.21■□□□□ 0.35
CDH9Q9ULB4 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC17.21■□□□□ 0.35
CDH9Q9ULB4 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC17.21■□□□□ 0.35
CDH9Q9ULB4 AL590560.3-201ENST00000623350 461 ntBASIC17.21■□□□□ 0.35
CDH9Q9ULB4 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
CDH9Q9ULB4 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC17.21■□□□□ 0.35
CDH9Q9ULB4 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CDH9Q9ULB4 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
CDH9Q9ULB4 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC17.21■□□□□ 0.35
CDH9Q9ULB4 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CDH9Q9ULB4 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CDH9Q9ULB4 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
CDH9Q9ULB4 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CDH9Q9ULB4 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
CDH9Q9ULB4 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
CDH9Q9ULB4 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CDH9Q9ULB4 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC17.2■□□□□ 0.34
CDH9Q9ULB4 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CDH9Q9ULB4 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
CDH9Q9ULB4 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC17.2■□□□□ 0.34
CDH9Q9ULB4 RPL37AP1-201ENST00000412502 279 ntBASIC17.2■□□□□ 0.34
CDH9Q9ULB4 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CDH9Q9ULB4 AL512638.1-201ENST00000457493 794 ntBASIC17.2■□□□□ 0.34
CDH9Q9ULB4 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
CDH9Q9ULB4 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CDH9Q9ULB4 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CDH9Q9ULB4 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC17.2■□□□□ 0.34
CDH9Q9ULB4 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC17.2■□□□□ 0.34
CDH9Q9ULB4 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CDH9Q9ULB4 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC17.2■□□□□ 0.34
CDH9Q9ULB4 TEX28P1-201ENST00000613479 1221 ntBASIC17.2■□□□□ 0.34
CDH9Q9ULB4 TEX28P2-201ENST00000617764 1221 ntBASIC17.2■□□□□ 0.34
CDH9Q9ULB4 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
CDH9Q9ULB4 AJ011932.1-201ENST00000621707 465 ntBASIC17.2■□□□□ 0.34
CDH9Q9ULB4 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
CDH9Q9ULB4 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms