Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 AC091167.2-201ENST00000579581 588 ntBASIC13.68□□□□□ -0.22
LIN7CQ9NUP9 CYGB-205ENST00000590175 830 ntTSL 3 BASIC13.68□□□□□ -0.22
LIN7CQ9NUP9 AC005593.1-201ENST00000624894 515 ntBASIC13.68□□□□□ -0.22
LIN7CQ9NUP9 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC13.68□□□□□ -0.22
LIN7CQ9NUP9 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC13.68□□□□□ -0.22
LIN7CQ9NUP9 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
LIN7CQ9NUP9 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LIN7CQ9NUP9 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC13.68□□□□□ -0.22
LIN7CQ9NUP9 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
LIN7CQ9NUP9 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LIN7CQ9NUP9 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
LIN7CQ9NUP9 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
LIN7CQ9NUP9 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
LIN7CQ9NUP9 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LIN7CQ9NUP9 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC13.68□□□□□ -0.22
LIN7CQ9NUP9 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LIN7CQ9NUP9 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LIN7CQ9NUP9 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC13.68□□□□□ -0.22
LIN7CQ9NUP9 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
LIN7CQ9NUP9 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC13.68□□□□□ -0.22
LIN7CQ9NUP9 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LIN7CQ9NUP9 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LIN7CQ9NUP9 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
LIN7CQ9NUP9 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
LIN7CQ9NUP9 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LIN7CQ9NUP9 AL603832.2-201ENST00000566195 2125 ntBASIC13.67□□□□□ -0.22
LIN7CQ9NUP9 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
LIN7CQ9NUP9 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC13.67□□□□□ -0.22
LIN7CQ9NUP9 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LIN7CQ9NUP9 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
LIN7CQ9NUP9 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
LIN7CQ9NUP9 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC13.67□□□□□ -0.22
LIN7CQ9NUP9 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
LIN7CQ9NUP9 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LIN7CQ9NUP9 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LIN7CQ9NUP9 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LIN7CQ9NUP9 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC13.67□□□□□ -0.22
LIN7CQ9NUP9 AC073621.1-201ENST00000392730 636 ntBASIC13.67□□□□□ -0.22
LIN7CQ9NUP9 ELK2BP-201ENST00000415014 1224 ntBASIC13.67□□□□□ -0.22
LIN7CQ9NUP9 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC13.67□□□□□ -0.22
LIN7CQ9NUP9 RNA5SP419-201ENST00000515908 135 ntBASIC13.67□□□□□ -0.22
LIN7CQ9NUP9 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC13.67□□□□□ -0.22
LIN7CQ9NUP9 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC13.67□□□□□ -0.22
LIN7CQ9NUP9 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC13.67□□□□□ -0.22
LIN7CQ9NUP9 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC13.67□□□□□ -0.22
LIN7CQ9NUP9 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC13.67□□□□□ -0.22
LIN7CQ9NUP9 MPDU1-223ENST00000582151 728 ntBASIC13.67□□□□□ -0.22
LIN7CQ9NUP9 AL356488.2-201ENST00000602755 427 ntBASIC13.67□□□□□ -0.22
LIN7CQ9NUP9 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
LIN7CQ9NUP9 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC13.67□□□□□ -0.22
LIN7CQ9NUP9 AL805961.1-202ENST00000641562 540 ntBASIC13.67□□□□□ -0.22
LIN7CQ9NUP9 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC13.67□□□□□ -0.22
LIN7CQ9NUP9 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC13.67□□□□□ -0.22
LIN7CQ9NUP9 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
LIN7CQ9NUP9 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
LIN7CQ9NUP9 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LIN7CQ9NUP9 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
LIN7CQ9NUP9 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LIN7CQ9NUP9 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
LIN7CQ9NUP9 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC13.67□□□□□ -0.22
LIN7CQ9NUP9 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LIN7CQ9NUP9 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
LIN7CQ9NUP9 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LIN7CQ9NUP9 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
LIN7CQ9NUP9 AL512652.2-201ENST00000625156 1716 ntBASIC13.67□□□□□ -0.22
LIN7CQ9NUP9 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC13.67□□□□□ -0.22
LIN7CQ9NUP9 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
LIN7CQ9NUP9 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
LIN7CQ9NUP9 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
LIN7CQ9NUP9 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC13.66□□□□□ -0.22
LIN7CQ9NUP9 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
LIN7CQ9NUP9 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LIN7CQ9NUP9 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LIN7CQ9NUP9 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
LIN7CQ9NUP9 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
LIN7CQ9NUP9 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
LIN7CQ9NUP9 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
LIN7CQ9NUP9 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
LIN7CQ9NUP9 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC13.66□□□□□ -0.22
LIN7CQ9NUP9 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
LIN7CQ9NUP9 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LIN7CQ9NUP9 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LIN7CQ9NUP9 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
LIN7CQ9NUP9 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LIN7CQ9NUP9 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LIN7CQ9NUP9 VILL-207ENST00000465644 1857 ntTSL 5 BASIC13.66□□□□□ -0.22
LIN7CQ9NUP9 PCGF3-213ENST00000620529 1899 ntBASIC13.66□□□□□ -0.22
LIN7CQ9NUP9 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
LIN7CQ9NUP9 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
LIN7CQ9NUP9 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LIN7CQ9NUP9 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LIN7CQ9NUP9 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LIN7CQ9NUP9 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LIN7CQ9NUP9 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LIN7CQ9NUP9 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LIN7CQ9NUP9 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC13.66□□□□□ -0.22
LIN7CQ9NUP9 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC13.66□□□□□ -0.22
LIN7CQ9NUP9 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LIN7CQ9NUP9 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
LIN7CQ9NUP9 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 54.9 ms