Protein–RNA interactions for Protein: Q9NSU2

TREX1, Three-prime repair exonuclease 1, humanhuman

Predictions only

Length 369 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1Q9NSU2 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TREX1Q9NSU2 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TREX1Q9NSU2 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC16.28■□□□□ 0.2
TREX1Q9NSU2 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TREX1Q9NSU2 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TREX1Q9NSU2 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
TREX1Q9NSU2 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC16.28■□□□□ 0.2
TREX1Q9NSU2 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
TREX1Q9NSU2 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TREX1Q9NSU2 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TREX1Q9NSU2 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC16.28■□□□□ 0.2
TREX1Q9NSU2 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TREX1Q9NSU2 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC16.28■□□□□ 0.2
TREX1Q9NSU2 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC16.28■□□□□ 0.2
TREX1Q9NSU2 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TREX1Q9NSU2 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC16.28■□□□□ 0.2
TREX1Q9NSU2 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TREX1Q9NSU2 GOLGA2P9-201ENST00000596977 1937 ntBASIC16.28■□□□□ 0.2
TREX1Q9NSU2 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
TREX1Q9NSU2 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
TREX1Q9NSU2 AL022342.1-201ENST00000400363 863 ntBASIC16.28■□□□□ 0.2
TREX1Q9NSU2 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
TREX1Q9NSU2 GPX1P2-201ENST00000429271 606 ntBASIC16.28■□□□□ 0.2
TREX1Q9NSU2 AL671277.1-201ENST00000429656 993 ntBASIC16.28■□□□□ 0.2
TREX1Q9NSU2 FAM58CP-201ENST00000435741 640 ntBASIC16.28■□□□□ 0.2
TREX1Q9NSU2 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC16.28■□□□□ 0.2
TREX1Q9NSU2 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC16.28■□□□□ 0.2
TREX1Q9NSU2 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC16.28■□□□□ 0.2
TREX1Q9NSU2 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TREX1Q9NSU2 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC16.28■□□□□ 0.2
TREX1Q9NSU2 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
TREX1Q9NSU2 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TREX1Q9NSU2 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TREX1Q9NSU2 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC16.28■□□□□ 0.2
TREX1Q9NSU2 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
TREX1Q9NSU2 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC16.28■□□□□ 0.2
TREX1Q9NSU2 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
TREX1Q9NSU2 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TREX1Q9NSU2 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC16.28■□□□□ 0.2
TREX1Q9NSU2 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
TREX1Q9NSU2 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC16.28■□□□□ 0.2
TREX1Q9NSU2 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
TREX1Q9NSU2 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC16.28■□□□□ 0.2
TREX1Q9NSU2 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC16.28■□□□□ 0.2
TREX1Q9NSU2 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TREX1Q9NSU2 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TREX1Q9NSU2 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
TREX1Q9NSU2 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
TREX1Q9NSU2 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
TREX1Q9NSU2 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
TREX1Q9NSU2 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TREX1Q9NSU2 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.2
TREX1Q9NSU2 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
TREX1Q9NSU2 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC16.27■□□□□ 0.2
TREX1Q9NSU2 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
TREX1Q9NSU2 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
TREX1Q9NSU2 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
TREX1Q9NSU2 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC16.27■□□□□ 0.2
TREX1Q9NSU2 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
TREX1Q9NSU2 TFAMP1-201ENST00000412727 736 ntBASIC16.27■□□□□ 0.2
TREX1Q9NSU2 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC16.27■□□□□ 0.2
TREX1Q9NSU2 AC098859.1-201ENST00000502915 1238 ntBASIC16.27■□□□□ 0.2
TREX1Q9NSU2 AC105233.2-201ENST00000523697 349 ntBASIC16.27■□□□□ 0.2
TREX1Q9NSU2 AF228730.5-201ENST00000530288 346 ntBASIC16.27■□□□□ 0.2
TREX1Q9NSU2 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC16.27■□□□□ 0.2
TREX1Q9NSU2 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
TREX1Q9NSU2 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC16.27■□□□□ 0.2
TREX1Q9NSU2 AL671883.3-201ENST00000603274 991 ntBASIC16.27■□□□□ 0.2
TREX1Q9NSU2 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TREX1Q9NSU2 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TREX1Q9NSU2 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TREX1Q9NSU2 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
TREX1Q9NSU2 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
TREX1Q9NSU2 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
TREX1Q9NSU2 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC16.27■□□□□ 0.19
TREX1Q9NSU2 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
TREX1Q9NSU2 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
TREX1Q9NSU2 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC16.27■□□□□ 0.19
TREX1Q9NSU2 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC16.27■□□□□ 0.19
TREX1Q9NSU2 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC16.27■□□□□ 0.19
TREX1Q9NSU2 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC16.27■□□□□ 0.19
TREX1Q9NSU2 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC16.26■□□□□ 0.19
TREX1Q9NSU2 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
TREX1Q9NSU2 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
TREX1Q9NSU2 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC16.26■□□□□ 0.19
TREX1Q9NSU2 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TREX1Q9NSU2 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC16.26■□□□□ 0.19
TREX1Q9NSU2 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
TREX1Q9NSU2 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC16.26■□□□□ 0.19
TREX1Q9NSU2 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
TREX1Q9NSU2 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
TREX1Q9NSU2 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
TREX1Q9NSU2 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC16.26■□□□□ 0.19
TREX1Q9NSU2 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TREX1Q9NSU2 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TREX1Q9NSU2 NEK7-201ENST00000367383 586 ntTSL 2 BASIC16.26■□□□□ 0.19
TREX1Q9NSU2 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC16.26■□□□□ 0.19
TREX1Q9NSU2 MIR940-201ENST00000401276 94 ntBASIC16.26■□□□□ 0.19
TREX1Q9NSU2 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC16.26■□□□□ 0.19
TREX1Q9NSU2 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms