Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC17.43■□□□□ 0.38
CISHQ9NSE2 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC17.43■□□□□ 0.38
CISHQ9NSE2 METTL23-205ENST00000588302 925 ntTSL 5 BASIC17.43■□□□□ 0.38
CISHQ9NSE2 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC17.43■□□□□ 0.38
CISHQ9NSE2 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC17.43■□□□□ 0.38
CISHQ9NSE2 ACE-204ENST00000428043 5120 ntTSL 2 BASIC17.43■□□□□ 0.38
CISHQ9NSE2 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC17.43■□□□□ 0.38
CISHQ9NSE2 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC17.43■□□□□ 0.38
CISHQ9NSE2 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
CISHQ9NSE2 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
CISHQ9NSE2 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CISHQ9NSE2 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
CISHQ9NSE2 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC17.43■□□□□ 0.38
CISHQ9NSE2 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
CISHQ9NSE2 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CISHQ9NSE2 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CISHQ9NSE2 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC17.43■□□□□ 0.38
CISHQ9NSE2 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC17.43■□□□□ 0.38
CISHQ9NSE2 PGR-209ENST00000617858 2816 ntTSL 5 BASIC17.43■□□□□ 0.38
CISHQ9NSE2 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CISHQ9NSE2 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CISHQ9NSE2 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CISHQ9NSE2 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CISHQ9NSE2 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
CISHQ9NSE2 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC17.42■□□□□ 0.38
CISHQ9NSE2 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CISHQ9NSE2 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
CISHQ9NSE2 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC17.42■□□□□ 0.38
CISHQ9NSE2 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CISHQ9NSE2 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CISHQ9NSE2 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CISHQ9NSE2 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CISHQ9NSE2 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC17.42■□□□□ 0.38
CISHQ9NSE2 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC17.42■□□□□ 0.38
CISHQ9NSE2 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CISHQ9NSE2 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC17.42■□□□□ 0.38
CISHQ9NSE2 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC17.42■□□□□ 0.38
CISHQ9NSE2 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CISHQ9NSE2 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CISHQ9NSE2 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC17.42■□□□□ 0.38
CISHQ9NSE2 AL365330.1-201ENST00000607459 531 ntBASIC17.42■□□□□ 0.38
CISHQ9NSE2 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CISHQ9NSE2 AL391005.1-201ENST00000623953 2435 ntBASIC17.42■□□□□ 0.38
CISHQ9NSE2 BANP-204ENST00000393208 2283 ntTSL 2 BASIC17.42■□□□□ 0.38
CISHQ9NSE2 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CISHQ9NSE2 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CISHQ9NSE2 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC17.42■□□□□ 0.38
CISHQ9NSE2 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CISHQ9NSE2 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CISHQ9NSE2 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CISHQ9NSE2 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC17.41■□□□□ 0.38
CISHQ9NSE2 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
CISHQ9NSE2 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC17.41■□□□□ 0.38
CISHQ9NSE2 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CISHQ9NSE2 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CISHQ9NSE2 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
CISHQ9NSE2 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC17.41■□□□□ 0.38
CISHQ9NSE2 FAM220BP-201ENST00000377689 816 ntBASIC17.41■□□□□ 0.38
CISHQ9NSE2 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CISHQ9NSE2 AC023141.5-201ENST00000458585 616 ntBASIC17.41■□□□□ 0.38
CISHQ9NSE2 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC17.41■□□□□ 0.38
CISHQ9NSE2 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CISHQ9NSE2 AC027612.4-201ENST00000605371 583 ntBASIC17.41■□□□□ 0.38
CISHQ9NSE2 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC17.41■□□□□ 0.38
CISHQ9NSE2 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CISHQ9NSE2 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CISHQ9NSE2 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
CISHQ9NSE2 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC17.4■□□□□ 0.38
CISHQ9NSE2 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
CISHQ9NSE2 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
CISHQ9NSE2 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CISHQ9NSE2 AC026691.1-201ENST00000602502 2017 ntBASIC17.4■□□□□ 0.38
CISHQ9NSE2 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CISHQ9NSE2 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CISHQ9NSE2 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
CISHQ9NSE2 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
CISHQ9NSE2 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CISHQ9NSE2 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
CISHQ9NSE2 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CISHQ9NSE2 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CISHQ9NSE2 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
CISHQ9NSE2 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CISHQ9NSE2 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC17.4■□□□□ 0.38
CISHQ9NSE2 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CISHQ9NSE2 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CISHQ9NSE2 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CISHQ9NSE2 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CISHQ9NSE2 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC17.4■□□□□ 0.38
CISHQ9NSE2 GPS2P2-201ENST00000430745 888 ntBASIC17.4■□□□□ 0.38
CISHQ9NSE2 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
CISHQ9NSE2 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
CISHQ9NSE2 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC17.4■□□□□ 0.38
CISHQ9NSE2 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC17.4■□□□□ 0.38
CISHQ9NSE2 AC061975.2-201ENST00000581722 295 ntBASIC17.4■□□□□ 0.38
CISHQ9NSE2 MIR4321-201ENST00000592276 80 ntBASIC17.4■□□□□ 0.38
CISHQ9NSE2 AC009093.7-201ENST00000623853 1223 ntBASIC17.4■□□□□ 0.38
CISHQ9NSE2 AC079781.4-201ENST00000641908 219 ntBASIC17.4■□□□□ 0.38
CISHQ9NSE2 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CISHQ9NSE2 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CISHQ9NSE2 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms