Protein–RNA interactions for Protein: Q9HD34

LYRM4, LYR motif-containing protein 4, humanhuman

Predictions only

Length 91 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYRM4Q9HD34 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
LYRM4Q9HD34 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
LYRM4Q9HD34 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC15.35■□□□□ 0.05
LYRM4Q9HD34 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
LYRM4Q9HD34 F11R-206ENST00000621309 4770 ntTSL 5 BASIC15.35■□□□□ 0.05
LYRM4Q9HD34 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
LYRM4Q9HD34 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC15.35■□□□□ 0.05
LYRM4Q9HD34 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
LYRM4Q9HD34 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC15.35■□□□□ 0.05
LYRM4Q9HD34 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
LYRM4Q9HD34 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC15.35■□□□□ 0.05
LYRM4Q9HD34 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC15.35■□□□□ 0.05
LYRM4Q9HD34 RPL30-202ENST00000396070 440 ntTSL 2 BASIC15.35■□□□□ 0.05
LYRM4Q9HD34 GPS2P2-201ENST00000430745 888 ntBASIC15.35■□□□□ 0.05
LYRM4Q9HD34 GATD1-206ENST00000526325 756 ntTSL 5 BASIC15.35■□□□□ 0.05
LYRM4Q9HD34 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC15.35■□□□□ 0.05
LYRM4Q9HD34 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC15.35■□□□□ 0.05
LYRM4Q9HD34 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC15.35■□□□□ 0.05
LYRM4Q9HD34 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC15.35■□□□□ 0.05
LYRM4Q9HD34 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
LYRM4Q9HD34 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
LYRM4Q9HD34 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
LYRM4Q9HD34 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
LYRM4Q9HD34 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
LYRM4Q9HD34 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
LYRM4Q9HD34 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
LYRM4Q9HD34 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC15.35■□□□□ 0.05
LYRM4Q9HD34 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC15.35■□□□□ 0.05
LYRM4Q9HD34 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC15.35■□□□□ 0.05
LYRM4Q9HD34 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
LYRM4Q9HD34 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC15.35■□□□□ 0.05
LYRM4Q9HD34 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
LYRM4Q9HD34 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
LYRM4Q9HD34 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
LYRM4Q9HD34 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
LYRM4Q9HD34 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC15.35■□□□□ 0.05
LYRM4Q9HD34 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
LYRM4Q9HD34 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
LYRM4Q9HD34 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC15.34■□□□□ 0.05
LYRM4Q9HD34 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
LYRM4Q9HD34 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
LYRM4Q9HD34 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
LYRM4Q9HD34 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
LYRM4Q9HD34 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
LYRM4Q9HD34 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC15.34■□□□□ 0.05
LYRM4Q9HD34 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
LYRM4Q9HD34 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
LYRM4Q9HD34 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
LYRM4Q9HD34 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
LYRM4Q9HD34 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC15.34■□□□□ 0.05
LYRM4Q9HD34 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
LYRM4Q9HD34 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
LYRM4Q9HD34 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
LYRM4Q9HD34 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
LYRM4Q9HD34 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC15.34■□□□□ 0.05
LYRM4Q9HD34 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
LYRM4Q9HD34 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
LYRM4Q9HD34 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
LYRM4Q9HD34 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC15.34■□□□□ 0.05
LYRM4Q9HD34 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
LYRM4Q9HD34 RPS8P6-201ENST00000426177 609 ntBASIC15.34■□□□□ 0.05
LYRM4Q9HD34 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC15.34■□□□□ 0.05
LYRM4Q9HD34 RBPMS2P1-201ENST00000437762 623 ntBASIC15.34■□□□□ 0.05
LYRM4Q9HD34 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC15.34■□□□□ 0.05
LYRM4Q9HD34 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
LYRM4Q9HD34 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC15.34■□□□□ 0.05
LYRM4Q9HD34 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC15.34■□□□□ 0.05
LYRM4Q9HD34 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC15.34■□□□□ 0.05
LYRM4Q9HD34 AP001160.2-201ENST00000596071 487 ntBASIC15.34■□□□□ 0.05
LYRM4Q9HD34 AC027612.4-201ENST00000605371 583 ntBASIC15.34■□□□□ 0.05
LYRM4Q9HD34 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC15.34■□□□□ 0.05
LYRM4Q9HD34 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
LYRM4Q9HD34 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
LYRM4Q9HD34 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC15.34■□□□□ 0.05
LYRM4Q9HD34 BANP-204ENST00000393208 2283 ntTSL 2 BASIC15.34■□□□□ 0.05
LYRM4Q9HD34 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
LYRM4Q9HD34 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
LYRM4Q9HD34 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
LYRM4Q9HD34 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC15.34■□□□□ 0.05
LYRM4Q9HD34 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
LYRM4Q9HD34 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
LYRM4Q9HD34 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
LYRM4Q9HD34 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
LYRM4Q9HD34 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
LYRM4Q9HD34 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC15.34■□□□□ 0.05
LYRM4Q9HD34 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
LYRM4Q9HD34 CES3-203ENST00000543856 3178 ntTSL 2 BASIC15.34■□□□□ 0.05
LYRM4Q9HD34 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC15.34■□□□□ 0.05
LYRM4Q9HD34 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC15.34■□□□□ 0.05
LYRM4Q9HD34 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC15.34■□□□□ 0.05
LYRM4Q9HD34 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
LYRM4Q9HD34 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
LYRM4Q9HD34 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
LYRM4Q9HD34 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
LYRM4Q9HD34 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC15.33■□□□□ 0.05
LYRM4Q9HD34 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
LYRM4Q9HD34 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
LYRM4Q9HD34 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
LYRM4Q9HD34 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.05
LYRM4Q9HD34 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms