Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 KRT8P12-202ENST00000472924 1397 ntBASIC17.58■□□□□ 0.4
NXF3Q9H4D5 SPDYE17-201ENST00000412399 783 ntBASIC17.58■□□□□ 0.4
NXF3Q9H4D5 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC17.58■□□□□ 0.4
NXF3Q9H4D5 SPTLC1P1-201ENST00000447199 261 ntBASIC17.58■□□□□ 0.4
NXF3Q9H4D5 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC17.58■□□□□ 0.4
NXF3Q9H4D5 REEP4-207ENST00000523293 913 ntTSL 3 BASIC17.58■□□□□ 0.4
NXF3Q9H4D5 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC17.58■□□□□ 0.4
NXF3Q9H4D5 AC190387.1-201ENST00000551683 408 ntBASIC17.58■□□□□ 0.4
NXF3Q9H4D5 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC17.58■□□□□ 0.4
NXF3Q9H4D5 SSH2-210ENST00000582084 560 ntTSL 3 BASIC17.58■□□□□ 0.4
NXF3Q9H4D5 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC17.58■□□□□ 0.4
NXF3Q9H4D5 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
NXF3Q9H4D5 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
NXF3Q9H4D5 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC17.58■□□□□ 0.4
NXF3Q9H4D5 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC17.58■□□□□ 0.4
NXF3Q9H4D5 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
NXF3Q9H4D5 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
NXF3Q9H4D5 AC009053.2-201ENST00000563701 2365 ntBASIC17.58■□□□□ 0.4
NXF3Q9H4D5 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
NXF3Q9H4D5 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NXF3Q9H4D5 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC17.57■□□□□ 0.4
NXF3Q9H4D5 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
NXF3Q9H4D5 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC17.57■□□□□ 0.4
NXF3Q9H4D5 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NXF3Q9H4D5 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
NXF3Q9H4D5 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
NXF3Q9H4D5 AC079328.2-201ENST00000561241 3354 ntBASIC17.57■□□□□ 0.4
NXF3Q9H4D5 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NXF3Q9H4D5 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC17.57■□□□□ 0.4
NXF3Q9H4D5 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
NXF3Q9H4D5 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
NXF3Q9H4D5 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
NXF3Q9H4D5 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
NXF3Q9H4D5 PNKD-204ENST00000436005 978 ntTSL 5 BASIC17.57■□□□□ 0.4
NXF3Q9H4D5 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC17.57■□□□□ 0.4
NXF3Q9H4D5 COQ9-214ENST00000567933 882 ntTSL 3 BASIC17.57■□□□□ 0.4
NXF3Q9H4D5 PAM16-215ENST00000577031 548 ntTSL 4 BASIC17.57■□□□□ 0.4
NXF3Q9H4D5 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC17.57■□□□□ 0.4
NXF3Q9H4D5 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC17.57■□□□□ 0.4
NXF3Q9H4D5 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
NXF3Q9H4D5 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NXF3Q9H4D5 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NXF3Q9H4D5 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
NXF3Q9H4D5 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
NXF3Q9H4D5 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
NXF3Q9H4D5 AL592424.1-201ENST00000563624 1536 ntBASIC17.57■□□□□ 0.4
NXF3Q9H4D5 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC17.56■□□□□ 0.4
NXF3Q9H4D5 REXO1L8P-201ENST00000604378 1897 ntBASIC17.56■□□□□ 0.4
NXF3Q9H4D5 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC17.56■□□□□ 0.4
NXF3Q9H4D5 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC17.56■□□□□ 0.4
NXF3Q9H4D5 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC17.56■□□□□ 0.4
NXF3Q9H4D5 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC17.56■□□□□ 0.4
NXF3Q9H4D5 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC17.56■□□□□ 0.4
NXF3Q9H4D5 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC17.56■□□□□ 0.4
NXF3Q9H4D5 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
NXF3Q9H4D5 AC044860.1-202ENST00000559481 777 ntBASIC17.56■□□□□ 0.4
NXF3Q9H4D5 PRR29-204ENST00000577953 565 ntTSL 4 BASIC17.56■□□□□ 0.4
NXF3Q9H4D5 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
NXF3Q9H4D5 AF228730.6-201ENST00000641497 218 ntBASIC17.56■□□□□ 0.4
NXF3Q9H4D5 AC084121.3-201ENST00000641716 218 ntBASIC17.56■□□□□ 0.4
NXF3Q9H4D5 AC105233.6-201ENST00000642093 218 ntBASIC17.56■□□□□ 0.4
NXF3Q9H4D5 LTB4R2-202ENST00000528054 3092 ntBASIC17.56■□□□□ 0.4
NXF3Q9H4D5 ME2P1-201ENST00000426028 1970 ntBASIC17.56■□□□□ 0.4
NXF3Q9H4D5 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
NXF3Q9H4D5 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
NXF3Q9H4D5 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
NXF3Q9H4D5 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
NXF3Q9H4D5 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
NXF3Q9H4D5 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC17.56■□□□□ 0.4
NXF3Q9H4D5 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
NXF3Q9H4D5 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NXF3Q9H4D5 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
NXF3Q9H4D5 AC020916.1-201ENST00000587762 1774 ntBASIC17.56■□□□□ 0.4
NXF3Q9H4D5 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC17.56■□□□□ 0.4
NXF3Q9H4D5 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC17.56■□□□□ 0.4
NXF3Q9H4D5 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
NXF3Q9H4D5 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
NXF3Q9H4D5 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NXF3Q9H4D5 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NXF3Q9H4D5 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NXF3Q9H4D5 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
NXF3Q9H4D5 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
NXF3Q9H4D5 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
NXF3Q9H4D5 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
NXF3Q9H4D5 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC17.55■□□□□ 0.4
NXF3Q9H4D5 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
NXF3Q9H4D5 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NXF3Q9H4D5 CYP4F24P-201ENST00000586049 1580 ntBASIC17.55■□□□□ 0.4
NXF3Q9H4D5 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NXF3Q9H4D5 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
NXF3Q9H4D5 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
NXF3Q9H4D5 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NXF3Q9H4D5 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
NXF3Q9H4D5 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
NXF3Q9H4D5 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC17.55■□□□□ 0.4
NXF3Q9H4D5 CRB3P1-201ENST00000449338 276 ntBASIC17.55■□□□□ 0.4
NXF3Q9H4D5 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
NXF3Q9H4D5 AC135586.1-201ENST00000539323 574 ntBASIC17.55■□□□□ 0.4
NXF3Q9H4D5 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
NXF3Q9H4D5 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms