Protein–RNA interactions for Protein: Q9C0A0

CNTNAP4, Contactin-associated protein-like 4, humanhuman

Predictions only

Length 1,308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP4Q9C0A0 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC20.28■□□□□ 0.84
CNTNAP4Q9C0A0 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CNTNAP4Q9C0A0 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC20.28■□□□□ 0.84
CNTNAP4Q9C0A0 KRT90P-201ENST00000549264 1064 ntBASIC20.28■□□□□ 0.84
CNTNAP4Q9C0A0 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC20.28■□□□□ 0.84
CNTNAP4Q9C0A0 EMC4-209ENST00000559421 497 ntTSL 2 BASIC20.28■□□□□ 0.84
CNTNAP4Q9C0A0 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC20.28■□□□□ 0.84
CNTNAP4Q9C0A0 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
CNTNAP4Q9C0A0 AC005252.2-201ENST00000624630 1141 ntBASIC20.28■□□□□ 0.84
CNTNAP4Q9C0A0 AC068587.10-201ENST00000641210 219 ntBASIC20.28■□□□□ 0.84
CNTNAP4Q9C0A0 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC20.28■□□□□ 0.84
CNTNAP4Q9C0A0 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
CNTNAP4Q9C0A0 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CNTNAP4Q9C0A0 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CNTNAP4Q9C0A0 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC20.28■□□□□ 0.84
CNTNAP4Q9C0A0 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CNTNAP4Q9C0A0 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CNTNAP4Q9C0A0 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
CNTNAP4Q9C0A0 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
CNTNAP4Q9C0A0 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CNTNAP4Q9C0A0 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC20.28■□□□□ 0.84
CNTNAP4Q9C0A0 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
CNTNAP4Q9C0A0 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC20.28■□□□□ 0.84
CNTNAP4Q9C0A0 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CNTNAP4Q9C0A0 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CNTNAP4Q9C0A0 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CNTNAP4Q9C0A0 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
CNTNAP4Q9C0A0 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CNTNAP4Q9C0A0 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC20.27■□□□□ 0.84
CNTNAP4Q9C0A0 YBX1P6-201ENST00000442962 1002 ntBASIC20.27■□□□□ 0.84
CNTNAP4Q9C0A0 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC20.27■□□□□ 0.84
CNTNAP4Q9C0A0 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC20.27■□□□□ 0.84
CNTNAP4Q9C0A0 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC20.27■□□□□ 0.84
CNTNAP4Q9C0A0 VDAC1P7-201ENST00000462417 847 ntBASIC20.27■□□□□ 0.84
CNTNAP4Q9C0A0 AC106760.1-201ENST00000508690 800 ntBASIC20.27■□□□□ 0.84
CNTNAP4Q9C0A0 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CNTNAP4Q9C0A0 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC20.27■□□□□ 0.84
CNTNAP4Q9C0A0 AC079316.1-201ENST00000548397 411 ntBASIC20.27■□□□□ 0.84
CNTNAP4Q9C0A0 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC20.27■□□□□ 0.84
CNTNAP4Q9C0A0 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC20.27■□□□□ 0.84
CNTNAP4Q9C0A0 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CNTNAP4Q9C0A0 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC20.27■□□□□ 0.84
CNTNAP4Q9C0A0 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC20.27■□□□□ 0.84
CNTNAP4Q9C0A0 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
CNTNAP4Q9C0A0 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
CNTNAP4Q9C0A0 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CNTNAP4Q9C0A0 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CNTNAP4Q9C0A0 EML3-217ENST00000531557 2509 ntTSL 5 BASIC20.27■□□□□ 0.84
CNTNAP4Q9C0A0 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CNTNAP4Q9C0A0 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
CNTNAP4Q9C0A0 MSTO2P-201ENST00000314835 1709 ntBASIC20.27■□□□□ 0.84
CNTNAP4Q9C0A0 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC20.27■□□□□ 0.84
CNTNAP4Q9C0A0 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CNTNAP4Q9C0A0 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
CNTNAP4Q9C0A0 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.83
CNTNAP4Q9C0A0 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
CNTNAP4Q9C0A0 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
CNTNAP4Q9C0A0 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
CNTNAP4Q9C0A0 ZBTB12BP-201ENST00000314232 1122 ntBASIC20.27■□□□□ 0.83
CNTNAP4Q9C0A0 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC20.27■□□□□ 0.83
CNTNAP4Q9C0A0 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.83
CNTNAP4Q9C0A0 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC20.27■□□□□ 0.83
CNTNAP4Q9C0A0 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC20.27■□□□□ 0.83
CNTNAP4Q9C0A0 PFN1P12-201ENST00000455938 534 ntBASIC20.27■□□□□ 0.83
CNTNAP4Q9C0A0 ZNF767P-206ENST00000513792 565 ntBASIC20.27■□□□□ 0.83
CNTNAP4Q9C0A0 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC20.27■□□□□ 0.83
CNTNAP4Q9C0A0 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
CNTNAP4Q9C0A0 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
CNTNAP4Q9C0A0 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.83
CNTNAP4Q9C0A0 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
CNTNAP4Q9C0A0 AL139099.5-201ENST00000635274 300 ntBASIC20.27■□□□□ 0.83
CNTNAP4Q9C0A0 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CNTNAP4Q9C0A0 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC20.26■□□□□ 0.83
CNTNAP4Q9C0A0 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CNTNAP4Q9C0A0 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC20.26■□□□□ 0.83
CNTNAP4Q9C0A0 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC20.26■□□□□ 0.83
CNTNAP4Q9C0A0 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CNTNAP4Q9C0A0 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CNTNAP4Q9C0A0 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
CNTNAP4Q9C0A0 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC20.26■□□□□ 0.83
CNTNAP4Q9C0A0 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CNTNAP4Q9C0A0 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CNTNAP4Q9C0A0 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC20.26■□□□□ 0.83
CNTNAP4Q9C0A0 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC20.26■□□□□ 0.83
CNTNAP4Q9C0A0 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CNTNAP4Q9C0A0 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CNTNAP4Q9C0A0 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CNTNAP4Q9C0A0 MIR1247-201ENST00000408206 136 ntBASIC20.26■□□□□ 0.83
CNTNAP4Q9C0A0 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC20.26■□□□□ 0.83
CNTNAP4Q9C0A0 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC20.26■□□□□ 0.83
CNTNAP4Q9C0A0 DUX4L45-201ENST00000566406 1057 ntBASIC20.26■□□□□ 0.83
CNTNAP4Q9C0A0 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC20.26■□□□□ 0.83
CNTNAP4Q9C0A0 AP001063.1-201ENST00000568332 529 ntBASIC20.26■□□□□ 0.83
CNTNAP4Q9C0A0 GNRHR2-203ENST00000581100 1187 ntBASIC20.26■□□□□ 0.83
CNTNAP4Q9C0A0 AC244669.2-201ENST00000612320 853 ntBASIC20.26■□□□□ 0.83
CNTNAP4Q9C0A0 AC009542.2-202ENST00000619004 1067 ntBASIC20.26■□□□□ 0.83
CNTNAP4Q9C0A0 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CNTNAP4Q9C0A0 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CNTNAP4Q9C0A0 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC20.25■□□□□ 0.83
CNTNAP4Q9C0A0 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms