Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
RTFDC1Q9BY42 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC19.64■□□□□ 0.74
RTFDC1Q9BY42 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC19.64■□□□□ 0.74
RTFDC1Q9BY42 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
RTFDC1Q9BY42 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC19.64■□□□□ 0.73
RTFDC1Q9BY42 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
RTFDC1Q9BY42 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RTFDC1Q9BY42 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RTFDC1Q9BY42 LBX2-201ENST00000341396 886 ntTSL 3 BASIC19.64■□□□□ 0.73
RTFDC1Q9BY42 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RTFDC1Q9BY42 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
RTFDC1Q9BY42 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC19.64■□□□□ 0.73
RTFDC1Q9BY42 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
RTFDC1Q9BY42 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC19.64■□□□□ 0.73
RTFDC1Q9BY42 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
RTFDC1Q9BY42 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC19.64■□□□□ 0.73
RTFDC1Q9BY42 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC19.64■□□□□ 0.73
RTFDC1Q9BY42 AC036164.1-201ENST00000570544 333 ntBASIC19.64■□□□□ 0.73
RTFDC1Q9BY42 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
RTFDC1Q9BY42 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC19.64■□□□□ 0.73
RTFDC1Q9BY42 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
RTFDC1Q9BY42 TECR-220ENST00000600083 1204 ntTSL 2 BASIC19.64■□□□□ 0.73
RTFDC1Q9BY42 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC19.64■□□□□ 0.73
RTFDC1Q9BY42 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC19.64■□□□□ 0.73
RTFDC1Q9BY42 MIR6869-201ENST00000619434 62 ntBASIC19.64■□□□□ 0.73
RTFDC1Q9BY42 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
RTFDC1Q9BY42 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
RTFDC1Q9BY42 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
RTFDC1Q9BY42 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC19.64■□□□□ 0.73
RTFDC1Q9BY42 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC19.64■□□□□ 0.73
RTFDC1Q9BY42 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
RTFDC1Q9BY42 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC19.64■□□□□ 0.73
RTFDC1Q9BY42 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RTFDC1Q9BY42 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RTFDC1Q9BY42 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC19.63■□□□□ 0.73
RTFDC1Q9BY42 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
RTFDC1Q9BY42 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RTFDC1Q9BY42 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RTFDC1Q9BY42 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RTFDC1Q9BY42 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
RTFDC1Q9BY42 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC19.63■□□□□ 0.73
RTFDC1Q9BY42 AMT-232ENST00000636199 1546 ntTSL 5 BASIC19.63■□□□□ 0.73
RTFDC1Q9BY42 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
RTFDC1Q9BY42 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
RTFDC1Q9BY42 HNRNPA1P48-201ENST00000562726 1377 ntBASIC19.63■□□□□ 0.73
RTFDC1Q9BY42 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC19.63■□□□□ 0.73
RTFDC1Q9BY42 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
RTFDC1Q9BY42 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
RTFDC1Q9BY42 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RTFDC1Q9BY42 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
RTFDC1Q9BY42 CTBP2P5-201ENST00000454986 1264 ntBASIC19.63■□□□□ 0.73
RTFDC1Q9BY42 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC19.63■□□□□ 0.73
RTFDC1Q9BY42 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC19.63■□□□□ 0.73
RTFDC1Q9BY42 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC19.63■□□□□ 0.73
RTFDC1Q9BY42 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC19.63■□□□□ 0.73
RTFDC1Q9BY42 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
RTFDC1Q9BY42 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC19.63■□□□□ 0.73
RTFDC1Q9BY42 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC19.63■□□□□ 0.73
RTFDC1Q9BY42 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC19.63■□□□□ 0.73
RTFDC1Q9BY42 PIGL-212ENST00000581006 554 ntTSL 4 BASIC19.63■□□□□ 0.73
RTFDC1Q9BY42 BRI3BPP1-201ENST00000594224 787 ntBASIC19.63■□□□□ 0.73
RTFDC1Q9BY42 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
RTFDC1Q9BY42 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RTFDC1Q9BY42 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
RTFDC1Q9BY42 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC19.63■□□□□ 0.73
RTFDC1Q9BY42 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
RTFDC1Q9BY42 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
RTFDC1Q9BY42 RNF216P1-203ENST00000404404 2427 ntBASIC19.63■□□□□ 0.73
RTFDC1Q9BY42 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC19.63■□□□□ 0.73
RTFDC1Q9BY42 AC078925.2-201ENST00000624013 1973 ntBASIC19.63■□□□□ 0.73
RTFDC1Q9BY42 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
RTFDC1Q9BY42 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC19.62■□□□□ 0.73
RTFDC1Q9BY42 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
RTFDC1Q9BY42 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC19.62■□□□□ 0.73
RTFDC1Q9BY42 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC19.62■□□□□ 0.73
RTFDC1Q9BY42 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
RTFDC1Q9BY42 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC19.62■□□□□ 0.73
RTFDC1Q9BY42 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RTFDC1Q9BY42 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RTFDC1Q9BY42 TUBB1P2-201ENST00000422712 1306 ntBASIC19.62■□□□□ 0.73
RTFDC1Q9BY42 TUBB1P1-201ENST00000503144 1300 ntBASIC19.62■□□□□ 0.73
RTFDC1Q9BY42 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
RTFDC1Q9BY42 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RTFDC1Q9BY42 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RTFDC1Q9BY42 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC19.62■□□□□ 0.73
RTFDC1Q9BY42 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC19.62■□□□□ 0.73
RTFDC1Q9BY42 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RTFDC1Q9BY42 AC004987.2-201ENST00000395959 1148 ntBASIC19.62■□□□□ 0.73
RTFDC1Q9BY42 AC099336.1-201ENST00000417053 1171 ntBASIC19.62■□□□□ 0.73
RTFDC1Q9BY42 AC245100.3-201ENST00000441281 285 ntBASIC19.62■□□□□ 0.73
RTFDC1Q9BY42 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC19.62■□□□□ 0.73
RTFDC1Q9BY42 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
RTFDC1Q9BY42 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC19.62■□□□□ 0.73
RTFDC1Q9BY42 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC19.62■□□□□ 0.73
RTFDC1Q9BY42 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC19.62■□□□□ 0.73
RTFDC1Q9BY42 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC19.62■□□□□ 0.73
RTFDC1Q9BY42 AC133539.2-201ENST00000604757 467 ntBASIC19.62■□□□□ 0.73
RTFDC1Q9BY42 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RTFDC1Q9BY42 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RTFDC1Q9BY42 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms