Protein–RNA interactions for Protein: Q96RW7

HMCN1, Hemicentin-1, humanhuman

Predictions only

Length 5,635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMCN1Q96RW7 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
HMCN1Q96RW7 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
HMCN1Q96RW7 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
HMCN1Q96RW7 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC4.84□□□□□ -1.64
HMCN1Q96RW7 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC4.84□□□□□ -1.64
HMCN1Q96RW7 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
HMCN1Q96RW7 KCNK9-201ENST00000303015 1245 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
HMCN1Q96RW7 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
HMCN1Q96RW7 TEX33-203ENST00000405091 1149 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.64
HMCN1Q96RW7 VSTM1-205ENST00000425006 608 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.64
HMCN1Q96RW7 EIF2B5-202ENST00000432569 984 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
HMCN1Q96RW7 AL365295.1-203ENST00000435322 566 ntTSL 4 BASIC4.84□□□□□ -1.64
HMCN1Q96RW7 PTGES3-203ENST00000436399 941 ntTSL 2 BASIC4.84□□□□□ -1.64
HMCN1Q96RW7 RPL18AP3-201ENST00000462885 528 ntBASIC4.84□□□□□ -1.64
HMCN1Q96RW7 RN7SL340P-201ENST00000470792 296 ntBASIC4.84□□□□□ -1.64
HMCN1Q96RW7 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC4.84□□□□□ -1.64
HMCN1Q96RW7 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
HMCN1Q96RW7 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC4.84□□□□□ -1.64
HMCN1Q96RW7 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC4.84□□□□□ -1.64
HMCN1Q96RW7 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC4.84□□□□□ -1.64
HMCN1Q96RW7 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
HMCN1Q96RW7 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC4.84□□□□□ -1.64
HMCN1Q96RW7 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC4.84□□□□□ -1.64
HMCN1Q96RW7 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC4.84□□□□□ -1.64
HMCN1Q96RW7 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
HMCN1Q96RW7 BX323043.1-201ENST00000641006 1765 ntBASIC4.84□□□□□ -1.64
HMCN1Q96RW7 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
HMCN1Q96RW7 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
HMCN1Q96RW7 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC4.84□□□□□ -1.64
HMCN1Q96RW7 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
HMCN1Q96RW7 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
HMCN1Q96RW7 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC4.83□□□□□ -1.64
HMCN1Q96RW7 RPA3-202ENST00000396682 847 ntAPPRIS P1 TSL 3 BASIC4.83□□□□□ -1.64
HMCN1Q96RW7 DEPDC1-AS1-201ENST00000428732 1247 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
HMCN1Q96RW7 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC4.83□□□□□ -1.64
HMCN1Q96RW7 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC4.83□□□□□ -1.64
HMCN1Q96RW7 PRB3-202ENST00000538488 1283 ntAPPRIS P5 TSL 5 BASIC4.83□□□□□ -1.64
HMCN1Q96RW7 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC4.83□□□□□ -1.64
HMCN1Q96RW7 RBM8B-201ENST00000555532 525 ntBASIC4.83□□□□□ -1.64
HMCN1Q96RW7 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC4.83□□□□□ -1.64
HMCN1Q96RW7 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC4.83□□□□□ -1.64
HMCN1Q96RW7 PGPEP1-203ENST00000595066 762 ntTSL 2 BASIC4.83□□□□□ -1.64
HMCN1Q96RW7 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC4.83□□□□□ -1.64
HMCN1Q96RW7 BNIP3P13-201ENST00000599968 566 ntBASIC4.83□□□□□ -1.64
HMCN1Q96RW7 LINC01115-203ENST00000606068 577 ntBASIC4.83□□□□□ -1.64
HMCN1Q96RW7 CSTP2-201ENST00000610599 398 ntBASIC4.83□□□□□ -1.64
HMCN1Q96RW7 AC138466.3-201ENST00000619983 221 ntBASIC4.83□□□□□ -1.64
HMCN1Q96RW7 AP000357.2-201ENST00000633827 597 ntTSL 2 BASIC4.83□□□□□ -1.64
HMCN1Q96RW7 PAX6-237ENST00000638696 1203 ntTSL 5 BASIC4.83□□□□□ -1.64
HMCN1Q96RW7 PAX6-238ENST00000638755 1161 ntTSL 5 BASIC4.83□□□□□ -1.64
HMCN1Q96RW7 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
HMCN1Q96RW7 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
HMCN1Q96RW7 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
HMCN1Q96RW7 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
HMCN1Q96RW7 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
HMCN1Q96RW7 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
HMCN1Q96RW7 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
HMCN1Q96RW7 ANO7L1-203ENST00000602586 1720 ntBASIC4.83□□□□□ -1.64
HMCN1Q96RW7 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
HMCN1Q96RW7 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
HMCN1Q96RW7 ALG11-203ENST00000523764 1404 ntTSL 2 BASIC4.83□□□□□ -1.64
HMCN1Q96RW7 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
HMCN1Q96RW7 IL9RP3-201ENST00000442856 1674 ntBASIC4.83□□□□□ -1.64
HMCN1Q96RW7 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC4.83□□□□□ -1.64
HMCN1Q96RW7 RN7SKP214-201ENST00000364208 315 ntBASIC4.83□□□□□ -1.64
HMCN1Q96RW7 AHCYP3-201ENST00000420053 1279 ntBASIC4.83□□□□□ -1.64
HMCN1Q96RW7 RPL7P35-201ENST00000446943 740 ntBASIC4.83□□□□□ -1.64
HMCN1Q96RW7 AC023906.1-201ENST00000486386 453 ntBASIC4.83□□□□□ -1.64
HMCN1Q96RW7 CYB561D1-207ENST00000527072 892 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
HMCN1Q96RW7 PRR13-209ENST00000549924 625 ntAPPRIS ALT2 TSL 2 BASIC4.83□□□□□ -1.64
HMCN1Q96RW7 AL157871.1-201ENST00000555428 429 ntTSL 3 BASIC4.83□□□□□ -1.64
HMCN1Q96RW7 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC4.83□□□□□ -1.64
HMCN1Q96RW7 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC4.83□□□□□ -1.64
HMCN1Q96RW7 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
HMCN1Q96RW7 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC4.83□□□□□ -1.64
HMCN1Q96RW7 AL137060.1-201ENST00000618151 2648 ntBASIC4.83□□□□□ -1.64
HMCN1Q96RW7 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
HMCN1Q96RW7 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
HMCN1Q96RW7 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC4.83□□□□□ -1.64
HMCN1Q96RW7 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC4.83□□□□□ -1.64
HMCN1Q96RW7 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC4.83□□□□□ -1.64
HMCN1Q96RW7 SERHL-201ENST00000359906 1346 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
HMCN1Q96RW7 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
HMCN1Q96RW7 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC4.83□□□□□ -1.64
HMCN1Q96RW7 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC4.83□□□□□ -1.64
HMCN1Q96RW7 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC4.83□□□□□ -1.64
HMCN1Q96RW7 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
HMCN1Q96RW7 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
HMCN1Q96RW7 JPT1-202ENST00000356033 1519 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
HMCN1Q96RW7 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
HMCN1Q96RW7 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
HMCN1Q96RW7 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
HMCN1Q96RW7 AC005740.2-201ENST00000511085 419 ntBASIC4.83□□□□□ -1.64
HMCN1Q96RW7 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC4.83□□□□□ -1.64
HMCN1Q96RW7 SHBG-207ENST00000570547 801 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
HMCN1Q96RW7 AC055811.3-201ENST00000584952 686 ntBASIC4.83□□□□□ -1.64
HMCN1Q96RW7 AC006547.3-201ENST00000600090 583 ntTSL 3 BASIC4.83□□□□□ -1.64
HMCN1Q96RW7 PDLIM1P1-201ENST00000604187 969 ntBASIC4.83□□□□□ -1.64
HMCN1Q96RW7 NCS1-203ENST00000630865 1092 ntTSL 3 BASIC4.83□□□□□ -1.64
HMCN1Q96RW7 AC021072.1-201ENST00000635789 835 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms