Protein–RNA interactions for Protein: Q92994

BRF1, Transcription factor IIIB 90 kDa subunit, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1Q92994 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
BRF1Q92994 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
BRF1Q92994 PMS2P7-201ENST00000506558 1336 ntBASIC19.25■□□□□ 0.67
BRF1Q92994 BSG-215ENST00000618006 1329 ntTSL 2 BASIC19.25■□□□□ 0.67
BRF1Q92994 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC19.25■□□□□ 0.67
BRF1Q92994 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
BRF1Q92994 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC19.25■□□□□ 0.67
BRF1Q92994 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
BRF1Q92994 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC19.25■□□□□ 0.67
BRF1Q92994 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
BRF1Q92994 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
BRF1Q92994 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
BRF1Q92994 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
BRF1Q92994 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
BRF1Q92994 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
BRF1Q92994 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
BRF1Q92994 NEK7-201ENST00000367383 586 ntTSL 2 BASIC19.25■□□□□ 0.67
BRF1Q92994 PMP22-202ENST00000395936 816 ntTSL 3 BASIC19.25■□□□□ 0.67
BRF1Q92994 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC19.25■□□□□ 0.67
BRF1Q92994 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC19.25■□□□□ 0.67
BRF1Q92994 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
BRF1Q92994 PRYP6-201ENST00000514804 343 ntBASIC19.25■□□□□ 0.67
BRF1Q92994 IGHV3OR16-6-201ENST00000568775 360 ntBASIC19.25■□□□□ 0.67
BRF1Q92994 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC19.25■□□□□ 0.67
BRF1Q92994 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
BRF1Q92994 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC19.25■□□□□ 0.67
BRF1Q92994 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
BRF1Q92994 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
BRF1Q92994 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC19.25■□□□□ 0.67
BRF1Q92994 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
BRF1Q92994 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
BRF1Q92994 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
BRF1Q92994 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
BRF1Q92994 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
BRF1Q92994 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
BRF1Q92994 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
BRF1Q92994 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
BRF1Q92994 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
BRF1Q92994 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
BRF1Q92994 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC19.24■□□□□ 0.67
BRF1Q92994 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
BRF1Q92994 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
BRF1Q92994 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
BRF1Q92994 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
BRF1Q92994 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
BRF1Q92994 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
BRF1Q92994 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
BRF1Q92994 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC19.24■□□□□ 0.67
BRF1Q92994 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
BRF1Q92994 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
BRF1Q92994 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
BRF1Q92994 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
BRF1Q92994 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC19.24■□□□□ 0.67
BRF1Q92994 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
BRF1Q92994 AC004832.2-201ENST00000426397 482 ntBASIC19.24■□□□□ 0.67
BRF1Q92994 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC19.24■□□□□ 0.67
BRF1Q92994 AL671277.1-201ENST00000429656 993 ntBASIC19.24■□□□□ 0.67
BRF1Q92994 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
BRF1Q92994 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC19.24■□□□□ 0.67
BRF1Q92994 AL135744.1-201ENST00000565098 629 ntBASIC19.24■□□□□ 0.67
BRF1Q92994 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
BRF1Q92994 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
BRF1Q92994 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC19.24■□□□□ 0.67
BRF1Q92994 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
BRF1Q92994 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC19.24■□□□□ 0.67
BRF1Q92994 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC19.24■□□□□ 0.67
BRF1Q92994 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC19.24■□□□□ 0.67
BRF1Q92994 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC19.24■□□□□ 0.67
BRF1Q92994 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
BRF1Q92994 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC19.24■□□□□ 0.67
BRF1Q92994 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC19.24■□□□□ 0.67
BRF1Q92994 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC19.24■□□□□ 0.67
BRF1Q92994 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC19.24■□□□□ 0.67
BRF1Q92994 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
BRF1Q92994 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
BRF1Q92994 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
BRF1Q92994 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
BRF1Q92994 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC19.23■□□□□ 0.67
BRF1Q92994 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
BRF1Q92994 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
BRF1Q92994 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
BRF1Q92994 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
BRF1Q92994 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
BRF1Q92994 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
BRF1Q92994 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
BRF1Q92994 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
BRF1Q92994 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC19.23■□□□□ 0.67
BRF1Q92994 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
BRF1Q92994 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
BRF1Q92994 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC19.23■□□□□ 0.67
BRF1Q92994 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC19.23■□□□□ 0.67
BRF1Q92994 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
BRF1Q92994 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
BRF1Q92994 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
BRF1Q92994 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
BRF1Q92994 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
BRF1Q92994 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC19.23■□□□□ 0.67
BRF1Q92994 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
BRF1Q92994 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
BRF1Q92994 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 81.6 ms