Protein–RNA interactions for Protein: Q8WYN0

ATG4A, Cysteine protease ATG4A, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AQ8WYN0 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ATG4AQ8WYN0 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC17■□□□□ 0.31
ATG4AQ8WYN0 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC17■□□□□ 0.31
ATG4AQ8WYN0 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
ATG4AQ8WYN0 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC16.99■□□□□ 0.31
ATG4AQ8WYN0 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
ATG4AQ8WYN0 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
ATG4AQ8WYN0 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
ATG4AQ8WYN0 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
ATG4AQ8WYN0 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC16.99■□□□□ 0.31
ATG4AQ8WYN0 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
ATG4AQ8WYN0 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC16.99■□□□□ 0.31
ATG4AQ8WYN0 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
ATG4AQ8WYN0 AC104640.1-201ENST00000562617 2109 ntBASIC16.99■□□□□ 0.31
ATG4AQ8WYN0 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
ATG4AQ8WYN0 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
ATG4AQ8WYN0 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
ATG4AQ8WYN0 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
ATG4AQ8WYN0 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC16.99■□□□□ 0.31
ATG4AQ8WYN0 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
ATG4AQ8WYN0 CXCL1P1-201ENST00000502804 216 ntBASIC16.99■□□□□ 0.31
ATG4AQ8WYN0 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
ATG4AQ8WYN0 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC16.99■□□□□ 0.31
ATG4AQ8WYN0 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
ATG4AQ8WYN0 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC16.99■□□□□ 0.31
ATG4AQ8WYN0 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC16.99■□□□□ 0.31
ATG4AQ8WYN0 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
ATG4AQ8WYN0 AL031055.1-201ENST00000606362 631 ntBASIC16.99■□□□□ 0.31
ATG4AQ8WYN0 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC16.99■□□□□ 0.31
ATG4AQ8WYN0 MIR7706-201ENST00000613747 67 ntBASIC16.99■□□□□ 0.31
ATG4AQ8WYN0 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
ATG4AQ8WYN0 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
ATG4AQ8WYN0 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
ATG4AQ8WYN0 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
ATG4AQ8WYN0 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
ATG4AQ8WYN0 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
ATG4AQ8WYN0 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC16.99■□□□□ 0.31
ATG4AQ8WYN0 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC16.99■□□□□ 0.31
ATG4AQ8WYN0 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
ATG4AQ8WYN0 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
ATG4AQ8WYN0 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
ATG4AQ8WYN0 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
ATG4AQ8WYN0 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC16.99■□□□□ 0.31
ATG4AQ8WYN0 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
ATG4AQ8WYN0 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
ATG4AQ8WYN0 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
ATG4AQ8WYN0 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
ATG4AQ8WYN0 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
ATG4AQ8WYN0 AC126177.1-201ENST00000547829 2218 ntBASIC16.98■□□□□ 0.31
ATG4AQ8WYN0 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC16.98■□□□□ 0.31
ATG4AQ8WYN0 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
ATG4AQ8WYN0 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
ATG4AQ8WYN0 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
ATG4AQ8WYN0 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
ATG4AQ8WYN0 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
ATG4AQ8WYN0 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC16.98■□□□□ 0.31
ATG4AQ8WYN0 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
ATG4AQ8WYN0 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
ATG4AQ8WYN0 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
ATG4AQ8WYN0 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
ATG4AQ8WYN0 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC16.98■□□□□ 0.31
ATG4AQ8WYN0 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
ATG4AQ8WYN0 CD99-202ENST00000381180 530 ntTSL 2 BASIC16.98■□□□□ 0.31
ATG4AQ8WYN0 MIR648-201ENST00000385046 94 ntBASIC16.98■□□□□ 0.31
ATG4AQ8WYN0 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
ATG4AQ8WYN0 AC108751.1-201ENST00000490852 363 ntBASIC16.98■□□□□ 0.31
ATG4AQ8WYN0 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC16.98■□□□□ 0.31
ATG4AQ8WYN0 POLD4-207ENST00000531239 584 ntTSL 2 BASIC16.98■□□□□ 0.31
ATG4AQ8WYN0 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC16.98■□□□□ 0.31
ATG4AQ8WYN0 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
ATG4AQ8WYN0 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC16.98■□□□□ 0.31
ATG4AQ8WYN0 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
ATG4AQ8WYN0 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC16.98■□□□□ 0.31
ATG4AQ8WYN0 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
ATG4AQ8WYN0 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
ATG4AQ8WYN0 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC16.98■□□□□ 0.31
ATG4AQ8WYN0 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
ATG4AQ8WYN0 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
ATG4AQ8WYN0 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
ATG4AQ8WYN0 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC16.98■□□□□ 0.31
ATG4AQ8WYN0 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
ATG4AQ8WYN0 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
ATG4AQ8WYN0 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
ATG4AQ8WYN0 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
ATG4AQ8WYN0 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
ATG4AQ8WYN0 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC16.97■□□□□ 0.31
ATG4AQ8WYN0 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC16.97■□□□□ 0.31
ATG4AQ8WYN0 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
ATG4AQ8WYN0 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
ATG4AQ8WYN0 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC16.97■□□□□ 0.31
ATG4AQ8WYN0 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
ATG4AQ8WYN0 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
ATG4AQ8WYN0 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
ATG4AQ8WYN0 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
ATG4AQ8WYN0 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC16.97■□□□□ 0.31
ATG4AQ8WYN0 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
ATG4AQ8WYN0 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
ATG4AQ8WYN0 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
ATG4AQ8WYN0 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC16.97■□□□□ 0.31
ATG4AQ8WYN0 IGLL3P-201ENST00000412472 434 ntBASIC16.97■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms