Protein–RNA interactions for Protein: Q8TDI0

CHD5, Chromodomain-helicase-DNA-binding protein 5, humanhuman

Predictions only

Length 1,954 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD5Q8TDI0 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
CHD5Q8TDI0 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CHD5Q8TDI0 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CHD5Q8TDI0 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CHD5Q8TDI0 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC16.38■□□□□ 0.21
CHD5Q8TDI0 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC16.38■□□□□ 0.21
CHD5Q8TDI0 HLA-DRB6-201ENST00000411500 1235 ntBASIC16.38■□□□□ 0.21
CHD5Q8TDI0 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC16.38■□□□□ 0.21
CHD5Q8TDI0 HIST3H2BA-201ENST00000436555 524 ntBASIC16.38■□□□□ 0.21
CHD5Q8TDI0 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
CHD5Q8TDI0 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC16.38■□□□□ 0.21
CHD5Q8TDI0 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CHD5Q8TDI0 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CHD5Q8TDI0 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC16.38■□□□□ 0.21
CHD5Q8TDI0 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC16.38■□□□□ 0.21
CHD5Q8TDI0 SPIB-207ENST00000597855 564 ntTSL 4 BASIC16.38■□□□□ 0.21
CHD5Q8TDI0 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
CHD5Q8TDI0 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
CHD5Q8TDI0 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CHD5Q8TDI0 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CHD5Q8TDI0 AC134407.2-201ENST00000625089 1978 ntBASIC16.38■□□□□ 0.21
CHD5Q8TDI0 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
CHD5Q8TDI0 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CHD5Q8TDI0 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
CHD5Q8TDI0 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC16.38■□□□□ 0.21
CHD5Q8TDI0 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
CHD5Q8TDI0 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CHD5Q8TDI0 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CHD5Q8TDI0 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CHD5Q8TDI0 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CHD5Q8TDI0 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CHD5Q8TDI0 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CHD5Q8TDI0 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC16.38■□□□□ 0.21
CHD5Q8TDI0 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CHD5Q8TDI0 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
CHD5Q8TDI0 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC16.38■□□□□ 0.21
CHD5Q8TDI0 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
CHD5Q8TDI0 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CHD5Q8TDI0 MIR661-201ENST00000384842 89 ntBASIC16.38■□□□□ 0.21
CHD5Q8TDI0 CENPM-205ENST00000404067 905 ntTSL 3 BASIC16.38■□□□□ 0.21
CHD5Q8TDI0 HAUS4P1-201ENST00000406739 1145 ntBASIC16.38■□□□□ 0.21
CHD5Q8TDI0 CENPM-206ENST00000407253 818 ntTSL 2 BASIC16.38■□□□□ 0.21
CHD5Q8TDI0 SPDYE17-201ENST00000412399 783 ntBASIC16.38■□□□□ 0.21
CHD5Q8TDI0 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CHD5Q8TDI0 AC026691.1-201ENST00000602502 2017 ntBASIC16.38■□□□□ 0.21
CHD5Q8TDI0 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CHD5Q8TDI0 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
CHD5Q8TDI0 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
CHD5Q8TDI0 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC16.38■□□□□ 0.21
CHD5Q8TDI0 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CHD5Q8TDI0 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CHD5Q8TDI0 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CHD5Q8TDI0 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CHD5Q8TDI0 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
CHD5Q8TDI0 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CHD5Q8TDI0 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CHD5Q8TDI0 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
CHD5Q8TDI0 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC16.37■□□□□ 0.21
CHD5Q8TDI0 AC027369.6-201ENST00000525520 931 ntBASIC16.37■□□□□ 0.21
CHD5Q8TDI0 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC16.37■□□□□ 0.21
CHD5Q8TDI0 AC243562.2-201ENST00000561247 970 ntBASIC16.37■□□□□ 0.21
CHD5Q8TDI0 GRN-214ENST00000589265 1632 ntTSL 5 BASIC16.37■□□□□ 0.21
CHD5Q8TDI0 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC16.37■□□□□ 0.21
CHD5Q8TDI0 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CHD5Q8TDI0 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CHD5Q8TDI0 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
CHD5Q8TDI0 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
CHD5Q8TDI0 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CHD5Q8TDI0 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC16.37■□□□□ 0.21
CHD5Q8TDI0 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
CHD5Q8TDI0 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CHD5Q8TDI0 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CHD5Q8TDI0 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
CHD5Q8TDI0 SYS1-203ENST00000414310 795 ntTSL 3 BASIC16.37■□□□□ 0.21
CHD5Q8TDI0 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC16.37■□□□□ 0.21
CHD5Q8TDI0 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC16.37■□□□□ 0.21
CHD5Q8TDI0 PRR29-204ENST00000577953 565 ntTSL 4 BASIC16.37■□□□□ 0.21
CHD5Q8TDI0 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC16.37■□□□□ 0.21
CHD5Q8TDI0 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
CHD5Q8TDI0 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CHD5Q8TDI0 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CHD5Q8TDI0 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CHD5Q8TDI0 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
CHD5Q8TDI0 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
CHD5Q8TDI0 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CHD5Q8TDI0 VILL-207ENST00000465644 1857 ntTSL 5 BASIC16.36■□□□□ 0.21
CHD5Q8TDI0 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC16.36■□□□□ 0.21
CHD5Q8TDI0 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC16.36■□□□□ 0.21
CHD5Q8TDI0 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
CHD5Q8TDI0 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CHD5Q8TDI0 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
CHD5Q8TDI0 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC16.36■□□□□ 0.21
CHD5Q8TDI0 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC16.36■□□□□ 0.21
CHD5Q8TDI0 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CHD5Q8TDI0 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
CHD5Q8TDI0 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CHD5Q8TDI0 MIR770-201ENST00000390219 98 ntBASIC16.36■□□□□ 0.21
CHD5Q8TDI0 AC004987.2-201ENST00000395959 1148 ntBASIC16.36■□□□□ 0.21
CHD5Q8TDI0 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC16.36■□□□□ 0.21
CHD5Q8TDI0 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms