Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC17.16■□□□□ 0.34
SHKBP1Q8TBC3 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
SHKBP1Q8TBC3 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC17.16■□□□□ 0.34
SHKBP1Q8TBC3 AL391256.1-201ENST00000443260 1855 ntBASIC17.16■□□□□ 0.34
SHKBP1Q8TBC3 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SHKBP1Q8TBC3 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SHKBP1Q8TBC3 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC17.16■□□□□ 0.34
SHKBP1Q8TBC3 PCDHA1-201ENST00000378133 2726 ntBASIC17.16■□□□□ 0.34
SHKBP1Q8TBC3 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
SHKBP1Q8TBC3 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SHKBP1Q8TBC3 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
SHKBP1Q8TBC3 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SHKBP1Q8TBC3 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SHKBP1Q8TBC3 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SHKBP1Q8TBC3 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SHKBP1Q8TBC3 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
SHKBP1Q8TBC3 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SHKBP1Q8TBC3 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SHKBP1Q8TBC3 RPL37AP1-201ENST00000412502 279 ntBASIC17.16■□□□□ 0.34
SHKBP1Q8TBC3 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SHKBP1Q8TBC3 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC17.16■□□□□ 0.34
SHKBP1Q8TBC3 AC009477.1-201ENST00000452936 217 ntBASIC17.16■□□□□ 0.34
SHKBP1Q8TBC3 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
SHKBP1Q8TBC3 MAX-210ENST00000555419 765 ntTSL 5 BASIC17.16■□□□□ 0.34
SHKBP1Q8TBC3 COQ9-214ENST00000567933 882 ntTSL 3 BASIC17.16■□□□□ 0.34
SHKBP1Q8TBC3 AC105021.1-202ENST00000570572 669 ntBASIC17.16■□□□□ 0.34
SHKBP1Q8TBC3 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC17.16■□□□□ 0.34
SHKBP1Q8TBC3 AL589739.1-201ENST00000607720 493 ntBASIC17.16■□□□□ 0.34
SHKBP1Q8TBC3 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
SHKBP1Q8TBC3 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SHKBP1Q8TBC3 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SHKBP1Q8TBC3 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC17.16■□□□□ 0.34
SHKBP1Q8TBC3 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SHKBP1Q8TBC3 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC17.16■□□□□ 0.34
SHKBP1Q8TBC3 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC17.16■□□□□ 0.34
SHKBP1Q8TBC3 CETN4P-206ENST00000642099 2168 ntBASIC17.16■□□□□ 0.34
SHKBP1Q8TBC3 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SHKBP1Q8TBC3 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SHKBP1Q8TBC3 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC17.16■□□□□ 0.34
SHKBP1Q8TBC3 AC063926.2-201ENST00000623766 1308 ntBASIC17.16■□□□□ 0.34
SHKBP1Q8TBC3 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SHKBP1Q8TBC3 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC17.16■□□□□ 0.34
SHKBP1Q8TBC3 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SHKBP1Q8TBC3 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
SHKBP1Q8TBC3 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC17.16■□□□□ 0.34
SHKBP1Q8TBC3 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SHKBP1Q8TBC3 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
SHKBP1Q8TBC3 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SHKBP1Q8TBC3 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SHKBP1Q8TBC3 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SHKBP1Q8TBC3 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC17.15■□□□□ 0.34
SHKBP1Q8TBC3 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SHKBP1Q8TBC3 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SHKBP1Q8TBC3 EDF1-203ENST00000371649 790 ntTSL 2 BASIC17.15■□□□□ 0.34
SHKBP1Q8TBC3 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
SHKBP1Q8TBC3 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC17.15■□□□□ 0.34
SHKBP1Q8TBC3 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SHKBP1Q8TBC3 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC17.15■□□□□ 0.34
SHKBP1Q8TBC3 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SHKBP1Q8TBC3 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC17.15■□□□□ 0.34
SHKBP1Q8TBC3 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC17.15■□□□□ 0.34
SHKBP1Q8TBC3 AL139011.1-202ENST00000642063 584 ntBASIC17.15■□□□□ 0.34
SHKBP1Q8TBC3 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC17.15■□□□□ 0.34
SHKBP1Q8TBC3 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
SHKBP1Q8TBC3 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC17.15■□□□□ 0.34
SHKBP1Q8TBC3 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC17.15■□□□□ 0.34
SHKBP1Q8TBC3 AL512652.2-201ENST00000625156 1716 ntBASIC17.15■□□□□ 0.34
SHKBP1Q8TBC3 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC17.15■□□□□ 0.34
SHKBP1Q8TBC3 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC17.15■□□□□ 0.34
SHKBP1Q8TBC3 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SHKBP1Q8TBC3 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC17.15■□□□□ 0.34
SHKBP1Q8TBC3 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
SHKBP1Q8TBC3 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SHKBP1Q8TBC3 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
SHKBP1Q8TBC3 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC17.14■□□□□ 0.34
SHKBP1Q8TBC3 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC17.14■□□□□ 0.34
SHKBP1Q8TBC3 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
SHKBP1Q8TBC3 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC17.14■□□□□ 0.33
SHKBP1Q8TBC3 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
SHKBP1Q8TBC3 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SHKBP1Q8TBC3 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SHKBP1Q8TBC3 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
SHKBP1Q8TBC3 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
SHKBP1Q8TBC3 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SHKBP1Q8TBC3 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SHKBP1Q8TBC3 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SHKBP1Q8TBC3 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SHKBP1Q8TBC3 PIN1P1-201ENST00000412108 996 ntBASIC17.14■□□□□ 0.33
SHKBP1Q8TBC3 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC17.14■□□□□ 0.33
SHKBP1Q8TBC3 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SHKBP1Q8TBC3 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC17.14■□□□□ 0.33
SHKBP1Q8TBC3 SPTLC1P1-201ENST00000447199 261 ntBASIC17.14■□□□□ 0.33
SHKBP1Q8TBC3 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC17.14■□□□□ 0.33
SHKBP1Q8TBC3 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC17.14■□□□□ 0.33
SHKBP1Q8TBC3 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SHKBP1Q8TBC3 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC17.14■□□□□ 0.33
SHKBP1Q8TBC3 AC009407.1-201ENST00000568958 598 ntBASIC17.14■□□□□ 0.33
SHKBP1Q8TBC3 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
SHKBP1Q8TBC3 SPDYE22P-201ENST00000582158 798 ntBASIC17.14■□□□□ 0.33
SHKBP1Q8TBC3 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC17.14■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 90.1 ms