Protein–RNA interactions for Protein: Q8NE35

CPEB3, Cytoplasmic polyadenylation element-binding protein 3, humanhuman

Known RBP Predictions only

Length 698 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB3Q8NE35 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
CPEB3Q8NE35 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC14.35□□□□□ -0.11
CPEB3Q8NE35 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
CPEB3Q8NE35 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CPEB3Q8NE35 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
CPEB3Q8NE35 CITED2-204ENST00000618718 901 ntTSL 2 BASIC14.35□□□□□ -0.11
CPEB3Q8NE35 AC023511.2-201ENST00000618803 211 ntBASIC14.35□□□□□ -0.11
CPEB3Q8NE35 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
CPEB3Q8NE35 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC14.35□□□□□ -0.11
CPEB3Q8NE35 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CPEB3Q8NE35 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
CPEB3Q8NE35 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CPEB3Q8NE35 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CPEB3Q8NE35 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC14.35□□□□□ -0.11
CPEB3Q8NE35 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CPEB3Q8NE35 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC14.35□□□□□ -0.11
CPEB3Q8NE35 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CPEB3Q8NE35 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
CPEB3Q8NE35 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CPEB3Q8NE35 AC005622.1-201ENST00000636801 1703 ntBASIC14.35□□□□□ -0.11
CPEB3Q8NE35 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC14.35□□□□□ -0.11
CPEB3Q8NE35 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC14.35□□□□□ -0.11
CPEB3Q8NE35 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CPEB3Q8NE35 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
CPEB3Q8NE35 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
CPEB3Q8NE35 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CPEB3Q8NE35 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CPEB3Q8NE35 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC14.34□□□□□ -0.11
CPEB3Q8NE35 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CPEB3Q8NE35 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CPEB3Q8NE35 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CPEB3Q8NE35 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CPEB3Q8NE35 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CPEB3Q8NE35 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CPEB3Q8NE35 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CPEB3Q8NE35 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CPEB3Q8NE35 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CPEB3Q8NE35 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CPEB3Q8NE35 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CPEB3Q8NE35 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CPEB3Q8NE35 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CPEB3Q8NE35 CD82-202ENST00000342935 967 ntTSL 5 BASIC14.34□□□□□ -0.11
CPEB3Q8NE35 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC14.34□□□□□ -0.11
CPEB3Q8NE35 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CPEB3Q8NE35 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CPEB3Q8NE35 MKNK2P1-201ENST00000437526 628 ntBASIC14.34□□□□□ -0.11
CPEB3Q8NE35 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC14.34□□□□□ -0.11
CPEB3Q8NE35 POU5F1P6-201ENST00000466990 990 ntBASIC14.34□□□□□ -0.11
CPEB3Q8NE35 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC14.34□□□□□ -0.11
CPEB3Q8NE35 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC14.34□□□□□ -0.11
CPEB3Q8NE35 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CPEB3Q8NE35 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC14.34□□□□□ -0.11
CPEB3Q8NE35 AC005829.1-201ENST00000570002 483 ntBASIC14.34□□□□□ -0.11
CPEB3Q8NE35 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC14.34□□□□□ -0.11
CPEB3Q8NE35 AC010327.4-202ENST00000591484 748 ntBASIC14.34□□□□□ -0.11
CPEB3Q8NE35 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC14.34□□□□□ -0.11
CPEB3Q8NE35 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CPEB3Q8NE35 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC14.34□□□□□ -0.11
CPEB3Q8NE35 AL162727.3-201ENST00000635661 2787 ntBASIC14.34□□□□□ -0.11
CPEB3Q8NE35 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
CPEB3Q8NE35 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CPEB3Q8NE35 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CPEB3Q8NE35 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CPEB3Q8NE35 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CPEB3Q8NE35 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC14.34□□□□□ -0.11
CPEB3Q8NE35 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CPEB3Q8NE35 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
CPEB3Q8NE35 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CPEB3Q8NE35 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CPEB3Q8NE35 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC14.34□□□□□ -0.11
CPEB3Q8NE35 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC14.34□□□□□ -0.11
CPEB3Q8NE35 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC14.34□□□□□ -0.11
CPEB3Q8NE35 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CPEB3Q8NE35 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CPEB3Q8NE35 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC14.34□□□□□ -0.11
CPEB3Q8NE35 GCK-209ENST00000616242 2260 ntTSL 5 BASIC14.34□□□□□ -0.11
CPEB3Q8NE35 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CPEB3Q8NE35 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
CPEB3Q8NE35 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
CPEB3Q8NE35 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
CPEB3Q8NE35 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
CPEB3Q8NE35 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
CPEB3Q8NE35 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
CPEB3Q8NE35 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
CPEB3Q8NE35 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
CPEB3Q8NE35 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
CPEB3Q8NE35 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
CPEB3Q8NE35 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
CPEB3Q8NE35 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CPEB3Q8NE35 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CPEB3Q8NE35 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC14.33□□□□□ -0.12
CPEB3Q8NE35 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC14.33□□□□□ -0.12
CPEB3Q8NE35 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
CPEB3Q8NE35 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
CPEB3Q8NE35 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
CPEB3Q8NE35 AC073439.1-201ENST00000624121 1774 ntBASIC14.33□□□□□ -0.12
CPEB3Q8NE35 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CPEB3Q8NE35 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC14.33□□□□□ -0.12
CPEB3Q8NE35 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC14.33□□□□□ -0.12
CPEB3Q8NE35 TFAMP1-201ENST00000412727 736 ntBASIC14.33□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms