Protein–RNA interactions for Protein: Q8NDM7

CFAP43, Cilia- and flagella-associated protein 43, humanhuman

Predictions only

Length 1,665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP43Q8NDM7 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC25.13■■□□□ 1.61
CFAP43Q8NDM7 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC25.13■■□□□ 1.61
CFAP43Q8NDM7 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC25.13■■□□□ 1.61
CFAP43Q8NDM7 AGGF1P2-201ENST00000426656 2106 ntBASIC25.13■■□□□ 1.61
CFAP43Q8NDM7 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
CFAP43Q8NDM7 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
CFAP43Q8NDM7 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC25.13■■□□□ 1.61
CFAP43Q8NDM7 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC25.13■■□□□ 1.61
CFAP43Q8NDM7 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
CFAP43Q8NDM7 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
CFAP43Q8NDM7 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC25.13■■□□□ 1.61
CFAP43Q8NDM7 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC25.13■■□□□ 1.61
CFAP43Q8NDM7 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC25.13■■□□□ 1.61
CFAP43Q8NDM7 AL022328.1-201ENST00000610050 478 ntBASIC25.13■■□□□ 1.61
CFAP43Q8NDM7 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC25.13■■□□□ 1.61
CFAP43Q8NDM7 ABBA01031660.1-201ENST00000635219 756 ntBASIC25.13■■□□□ 1.61
CFAP43Q8NDM7 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
CFAP43Q8NDM7 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC25.13■■□□□ 1.61
CFAP43Q8NDM7 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
CFAP43Q8NDM7 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC25.13■■□□□ 1.61
CFAP43Q8NDM7 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC25.12■■□□□ 1.61
CFAP43Q8NDM7 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC25.12■■□□□ 1.61
CFAP43Q8NDM7 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
CFAP43Q8NDM7 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
CFAP43Q8NDM7 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
CFAP43Q8NDM7 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
CFAP43Q8NDM7 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC25.12■■□□□ 1.61
CFAP43Q8NDM7 FLJ38576-201ENST00000623820 2459 ntBASIC25.12■■□□□ 1.61
CFAP43Q8NDM7 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC25.12■■□□□ 1.61
CFAP43Q8NDM7 SPIB-207ENST00000597855 564 ntTSL 4 BASIC25.12■■□□□ 1.61
CFAP43Q8NDM7 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC25.12■■□□□ 1.61
CFAP43Q8NDM7 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC25.12■■□□□ 1.61
CFAP43Q8NDM7 AC009542.2-202ENST00000619004 1067 ntBASIC25.12■■□□□ 1.61
CFAP43Q8NDM7 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
CFAP43Q8NDM7 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC25.12■■□□□ 1.61
CFAP43Q8NDM7 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC25.12■■□□□ 1.61
CFAP43Q8NDM7 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC25.12■■□□□ 1.61
CFAP43Q8NDM7 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
CFAP43Q8NDM7 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC25.12■■□□□ 1.61
CFAP43Q8NDM7 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC25.12■■□□□ 1.61
CFAP43Q8NDM7 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC25.11■■□□□ 1.61
CFAP43Q8NDM7 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC25.11■■□□□ 1.61
CFAP43Q8NDM7 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
CFAP43Q8NDM7 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC25.11■■□□□ 1.61
CFAP43Q8NDM7 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC25.11■■□□□ 1.61
CFAP43Q8NDM7 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC25.11■■□□□ 1.61
CFAP43Q8NDM7 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC25.11■■□□□ 1.61
CFAP43Q8NDM7 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC25.11■■□□□ 1.61
CFAP43Q8NDM7 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC25.11■■□□□ 1.61
CFAP43Q8NDM7 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC25.11■■□□□ 1.61
CFAP43Q8NDM7 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC25.11■■□□□ 1.61
CFAP43Q8NDM7 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
CFAP43Q8NDM7 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC25.11■■□□□ 1.61
CFAP43Q8NDM7 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC25.11■■□□□ 1.61
CFAP43Q8NDM7 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
CFAP43Q8NDM7 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC25.1■■□□□ 1.61
CFAP43Q8NDM7 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC25.1■■□□□ 1.61
CFAP43Q8NDM7 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC25.1■■□□□ 1.61
CFAP43Q8NDM7 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
CFAP43Q8NDM7 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
CFAP43Q8NDM7 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
CFAP43Q8NDM7 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
CFAP43Q8NDM7 ELK2AP-201ENST00000392510 1007 ntBASIC25.1■■□□□ 1.61
CFAP43Q8NDM7 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
CFAP43Q8NDM7 AC006033.1-201ENST00000440505 426 ntBASIC25.1■■□□□ 1.61
CFAP43Q8NDM7 PFN1P12-201ENST00000455938 534 ntBASIC25.1■■□□□ 1.61
CFAP43Q8NDM7 AC068587.3-201ENST00000526613 355 ntBASIC25.1■■□□□ 1.61
CFAP43Q8NDM7 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC25.1■■□□□ 1.61
CFAP43Q8NDM7 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC25.1■■□□□ 1.61
CFAP43Q8NDM7 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC25.1■■□□□ 1.61
CFAP43Q8NDM7 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC25.1■■□□□ 1.61
CFAP43Q8NDM7 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC25.1■■□□□ 1.61
CFAP43Q8NDM7 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
CFAP43Q8NDM7 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC25.1■■□□□ 1.61
CFAP43Q8NDM7 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
CFAP43Q8NDM7 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC25.1■■□□□ 1.61
CFAP43Q8NDM7 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC25.1■■□□□ 1.61
CFAP43Q8NDM7 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC25.1■■□□□ 1.61
CFAP43Q8NDM7 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC25.1■■□□□ 1.61
CFAP43Q8NDM7 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC25.1■■□□□ 1.61
CFAP43Q8NDM7 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC25.1■■□□□ 1.61
CFAP43Q8NDM7 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
CFAP43Q8NDM7 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
CFAP43Q8NDM7 MIR3615-201ENST00000581999 87 ntBASIC25.1■■□□□ 1.61
CFAP43Q8NDM7 LINC01115-203ENST00000606068 577 ntBASIC25.1■■□□□ 1.61
CFAP43Q8NDM7 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC25.1■■□□□ 1.61
CFAP43Q8NDM7 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
CFAP43Q8NDM7 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
CFAP43Q8NDM7 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
CFAP43Q8NDM7 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
CFAP43Q8NDM7 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC25.09■■□□□ 1.61
CFAP43Q8NDM7 AC005052.1-201ENST00000625181 2492 ntBASIC25.09■■□□□ 1.61
CFAP43Q8NDM7 MTHFR-217ENST00000641820 1569 ntBASIC25.09■■□□□ 1.61
CFAP43Q8NDM7 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC25.09■■□□□ 1.61
CFAP43Q8NDM7 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC25.09■■□□□ 1.61
CFAP43Q8NDM7 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC25.09■■□□□ 1.61
CFAP43Q8NDM7 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
CFAP43Q8NDM7 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC25.09■■□□□ 1.61
CFAP43Q8NDM7 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC25.09■■□□□ 1.61
CFAP43Q8NDM7 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC25.09■■□□□ 1.61
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms