Protein–RNA interactions for Protein: Q8NB78

KDM1B, Lysine-specific histone demethylase 1B, humanhuman

Predictions only

Length 822 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1BQ8NB78 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC16.7■□□□□ 0.26
KDM1BQ8NB78 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
KDM1BQ8NB78 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC16.7■□□□□ 0.26
KDM1BQ8NB78 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
KDM1BQ8NB78 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
KDM1BQ8NB78 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
KDM1BQ8NB78 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
KDM1BQ8NB78 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
KDM1BQ8NB78 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC16.69■□□□□ 0.26
KDM1BQ8NB78 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
KDM1BQ8NB78 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
KDM1BQ8NB78 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
KDM1BQ8NB78 AC008894.3-201ENST00000624324 3103 ntBASIC16.69■□□□□ 0.26
KDM1BQ8NB78 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC16.69■□□□□ 0.26
KDM1BQ8NB78 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC16.69■□□□□ 0.26
KDM1BQ8NB78 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
KDM1BQ8NB78 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
KDM1BQ8NB78 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
KDM1BQ8NB78 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC16.69■□□□□ 0.26
KDM1BQ8NB78 AC093724.1-201ENST00000448659 1027 ntBASIC16.69■□□□□ 0.26
KDM1BQ8NB78 PPP6R2P1-201ENST00000450880 1275 ntBASIC16.69■□□□□ 0.26
KDM1BQ8NB78 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC16.69■□□□□ 0.26
KDM1BQ8NB78 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC16.69■□□□□ 0.26
KDM1BQ8NB78 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC16.69■□□□□ 0.26
KDM1BQ8NB78 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC16.69■□□□□ 0.26
KDM1BQ8NB78 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC16.69■□□□□ 0.26
KDM1BQ8NB78 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
KDM1BQ8NB78 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
KDM1BQ8NB78 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
KDM1BQ8NB78 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC16.69■□□□□ 0.26
KDM1BQ8NB78 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
KDM1BQ8NB78 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
KDM1BQ8NB78 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
KDM1BQ8NB78 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
KDM1BQ8NB78 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC16.69■□□□□ 0.26
KDM1BQ8NB78 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
KDM1BQ8NB78 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
KDM1BQ8NB78 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
KDM1BQ8NB78 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC16.69■□□□□ 0.26
KDM1BQ8NB78 PCDHA1-201ENST00000378133 2726 ntBASIC16.69■□□□□ 0.26
KDM1BQ8NB78 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
KDM1BQ8NB78 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
KDM1BQ8NB78 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
KDM1BQ8NB78 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
KDM1BQ8NB78 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
KDM1BQ8NB78 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC16.68■□□□□ 0.26
KDM1BQ8NB78 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
KDM1BQ8NB78 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
KDM1BQ8NB78 AMT-206ENST00000458307 1860 ntTSL 2 BASIC16.68■□□□□ 0.26
KDM1BQ8NB78 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
KDM1BQ8NB78 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
KDM1BQ8NB78 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
KDM1BQ8NB78 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC16.68■□□□□ 0.26
KDM1BQ8NB78 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC16.68■□□□□ 0.26
KDM1BQ8NB78 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC16.68■□□□□ 0.26
KDM1BQ8NB78 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC16.68■□□□□ 0.26
KDM1BQ8NB78 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
KDM1BQ8NB78 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC16.68■□□□□ 0.26
KDM1BQ8NB78 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC16.68■□□□□ 0.26
KDM1BQ8NB78 INO80C-206ENST00000586489 594 ntTSL 3 BASIC16.68■□□□□ 0.26
KDM1BQ8NB78 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC16.68■□□□□ 0.26
KDM1BQ8NB78 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC16.68■□□□□ 0.26
KDM1BQ8NB78 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
KDM1BQ8NB78 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
KDM1BQ8NB78 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
KDM1BQ8NB78 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC16.68■□□□□ 0.26
KDM1BQ8NB78 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
KDM1BQ8NB78 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
KDM1BQ8NB78 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
KDM1BQ8NB78 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
KDM1BQ8NB78 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC16.68■□□□□ 0.26
KDM1BQ8NB78 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC16.68■□□□□ 0.26
KDM1BQ8NB78 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
KDM1BQ8NB78 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC16.68■□□□□ 0.26
KDM1BQ8NB78 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC16.68■□□□□ 0.26
KDM1BQ8NB78 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
KDM1BQ8NB78 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
KDM1BQ8NB78 AC092364.2-201ENST00000596710 2692 ntBASIC16.68■□□□□ 0.26
KDM1BQ8NB78 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
KDM1BQ8NB78 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
KDM1BQ8NB78 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
KDM1BQ8NB78 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
KDM1BQ8NB78 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
KDM1BQ8NB78 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC16.67■□□□□ 0.26
KDM1BQ8NB78 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
KDM1BQ8NB78 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
KDM1BQ8NB78 FO538757.1-201ENST00000623083 1397 ntBASIC16.67■□□□□ 0.26
KDM1BQ8NB78 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC16.67■□□□□ 0.26
KDM1BQ8NB78 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC16.67■□□□□ 0.26
KDM1BQ8NB78 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
KDM1BQ8NB78 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
KDM1BQ8NB78 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
KDM1BQ8NB78 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
KDM1BQ8NB78 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC16.67■□□□□ 0.26
KDM1BQ8NB78 GOLGA2P9-201ENST00000596977 1937 ntBASIC16.67■□□□□ 0.26
KDM1BQ8NB78 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
KDM1BQ8NB78 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
KDM1BQ8NB78 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
KDM1BQ8NB78 AL031731.1-201ENST00000642131 2094 ntBASIC16.67■□□□□ 0.26
KDM1BQ8NB78 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 79.8 ms