Protein–RNA interactions for Protein: Q8N7H5

PAF1, RNA polymerase II-associated factor 1 homolog, humanhuman

Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1Q8N7H5 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PAF1Q8N7H5 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PAF1Q8N7H5 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
PAF1Q8N7H5 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
PAF1Q8N7H5 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC16.87■□□□□ 0.29
PAF1Q8N7H5 LINC00895-201ENST00000629028 1637 ntBASIC16.87■□□□□ 0.29
PAF1Q8N7H5 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
PAF1Q8N7H5 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PAF1Q8N7H5 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
PAF1Q8N7H5 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PAF1Q8N7H5 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PAF1Q8N7H5 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC16.87■□□□□ 0.29
PAF1Q8N7H5 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
PAF1Q8N7H5 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC16.87■□□□□ 0.29
PAF1Q8N7H5 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC16.87■□□□□ 0.29
PAF1Q8N7H5 PC-204ENST00000524491 1714 ntTSL 2 BASIC16.87■□□□□ 0.29
PAF1Q8N7H5 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
PAF1Q8N7H5 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC16.87■□□□□ 0.29
PAF1Q8N7H5 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
PAF1Q8N7H5 CTBP1-AS2-206ENST00000581398 5652 ntBASIC16.87■□□□□ 0.29
PAF1Q8N7H5 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC16.87■□□□□ 0.29
PAF1Q8N7H5 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PAF1Q8N7H5 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PAF1Q8N7H5 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC16.86■□□□□ 0.29
PAF1Q8N7H5 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
PAF1Q8N7H5 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PAF1Q8N7H5 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PAF1Q8N7H5 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PAF1Q8N7H5 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PAF1Q8N7H5 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
PAF1Q8N7H5 CDK12-201ENST00000430627 5918 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PAF1Q8N7H5 GCK-202ENST00000345378 2421 ntTSL 2 BASIC16.86■□□□□ 0.29
PAF1Q8N7H5 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PAF1Q8N7H5 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
PAF1Q8N7H5 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PAF1Q8N7H5 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC16.86■□□□□ 0.29
PAF1Q8N7H5 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC16.86■□□□□ 0.29
PAF1Q8N7H5 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PAF1Q8N7H5 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC16.86■□□□□ 0.29
PAF1Q8N7H5 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PAF1Q8N7H5 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
PAF1Q8N7H5 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
PAF1Q8N7H5 RNU1-129P-201ENST00000384064 167 ntBASIC16.86■□□□□ 0.29
PAF1Q8N7H5 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
PAF1Q8N7H5 COA5-202ENST00000409997 557 ntTSL 4 BASIC16.86■□□□□ 0.29
PAF1Q8N7H5 AC211486.1-202ENST00000416371 468 ntBASIC16.86■□□□□ 0.29
PAF1Q8N7H5 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC16.86■□□□□ 0.29
PAF1Q8N7H5 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC16.86■□□□□ 0.29
PAF1Q8N7H5 AC112482.1-201ENST00000492080 688 ntBASIC16.86■□□□□ 0.29
PAF1Q8N7H5 AC211476.1-201ENST00000503899 468 ntBASIC16.86■□□□□ 0.29
PAF1Q8N7H5 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC16.86■□□□□ 0.29
PAF1Q8N7H5 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC16.86■□□□□ 0.29
PAF1Q8N7H5 U1.21-201ENST00000580816 167 ntBASIC16.86■□□□□ 0.29
PAF1Q8N7H5 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC16.86■□□□□ 0.29
PAF1Q8N7H5 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC16.86■□□□□ 0.29
PAF1Q8N7H5 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC16.86■□□□□ 0.29
PAF1Q8N7H5 SIGLEC29P-201ENST00000599873 1114 ntBASIC16.86■□□□□ 0.29
PAF1Q8N7H5 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC16.86■□□□□ 0.29
PAF1Q8N7H5 AC021097.1-201ENST00000607902 574 ntBASIC16.86■□□□□ 0.29
PAF1Q8N7H5 AC079781.4-201ENST00000641908 219 ntBASIC16.86■□□□□ 0.29
PAF1Q8N7H5 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC16.86■□□□□ 0.29
PAF1Q8N7H5 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
PAF1Q8N7H5 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PAF1Q8N7H5 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
PAF1Q8N7H5 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
PAF1Q8N7H5 UBALD1-205ENST00000590891 2641 ntBASIC16.86■□□□□ 0.29
PAF1Q8N7H5 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PAF1Q8N7H5 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PAF1Q8N7H5 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
PAF1Q8N7H5 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PAF1Q8N7H5 AL671710.1-201ENST00000610245 2349 ntBASIC16.86■□□□□ 0.29
PAF1Q8N7H5 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PAF1Q8N7H5 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
PAF1Q8N7H5 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PAF1Q8N7H5 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PAF1Q8N7H5 TICRR-201ENST00000268138 6775 ntAPPRIS P3 TSL 5 BASIC16.85■□□□□ 0.29
PAF1Q8N7H5 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
PAF1Q8N7H5 AL603756.1-201ENST00000606511 2163 ntBASIC16.85■□□□□ 0.29
PAF1Q8N7H5 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PAF1Q8N7H5 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
PAF1Q8N7H5 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PAF1Q8N7H5 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
PAF1Q8N7H5 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PAF1Q8N7H5 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PAF1Q8N7H5 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC16.85■□□□□ 0.29
PAF1Q8N7H5 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
PAF1Q8N7H5 DCHS1-201ENST00000299441 10765 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PAF1Q8N7H5 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC16.85■□□□□ 0.29
PAF1Q8N7H5 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
PAF1Q8N7H5 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
PAF1Q8N7H5 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PAF1Q8N7H5 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
PAF1Q8N7H5 RPSAP43-201ENST00000402237 625 ntBASIC16.85■□□□□ 0.29
PAF1Q8N7H5 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC16.85■□□□□ 0.29
PAF1Q8N7H5 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC16.85■□□□□ 0.29
PAF1Q8N7H5 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PAF1Q8N7H5 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC16.85■□□□□ 0.29
PAF1Q8N7H5 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC16.85■□□□□ 0.29
PAF1Q8N7H5 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC16.85■□□□□ 0.29
PAF1Q8N7H5 MIR4492-201ENST00000581627 80 ntBASIC16.85■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms