Protein–RNA interactions for Protein: Q8N616

LINC00311, Putative uncharacterized protein encoded by LINC00311, humanhuman

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00311Q8N616 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
LINC00311Q8N616 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
LINC00311Q8N616 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
LINC00311Q8N616 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC13.24□□□□□ -0.29
LINC00311Q8N616 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
LINC00311Q8N616 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
LINC00311Q8N616 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC13.24□□□□□ -0.29
LINC00311Q8N616 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
LINC00311Q8N616 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
LINC00311Q8N616 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
LINC00311Q8N616 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
LINC00311Q8N616 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC13.24□□□□□ -0.29
LINC00311Q8N616 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
LINC00311Q8N616 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
LINC00311Q8N616 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
LINC00311Q8N616 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
LINC00311Q8N616 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC13.24□□□□□ -0.29
LINC00311Q8N616 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
LINC00311Q8N616 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC13.24□□□□□ -0.29
LINC00311Q8N616 GPX1P2-201ENST00000429271 606 ntBASIC13.24□□□□□ -0.29
LINC00311Q8N616 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC13.24□□□□□ -0.29
LINC00311Q8N616 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC13.24□□□□□ -0.29
LINC00311Q8N616 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
LINC00311Q8N616 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC13.24□□□□□ -0.29
LINC00311Q8N616 AC061975.2-201ENST00000581722 295 ntBASIC13.24□□□□□ -0.29
LINC00311Q8N616 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
LINC00311Q8N616 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC13.24□□□□□ -0.29
LINC00311Q8N616 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC13.24□□□□□ -0.29
LINC00311Q8N616 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC13.24□□□□□ -0.29
LINC00311Q8N616 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
LINC00311Q8N616 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
LINC00311Q8N616 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC13.24□□□□□ -0.29
LINC00311Q8N616 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC13.24□□□□□ -0.29
LINC00311Q8N616 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
LINC00311Q8N616 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC13.24□□□□□ -0.29
LINC00311Q8N616 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC13.24□□□□□ -0.29
LINC00311Q8N616 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC13.24□□□□□ -0.29
LINC00311Q8N616 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
LINC00311Q8N616 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
LINC00311Q8N616 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC13.24□□□□□ -0.29
LINC00311Q8N616 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
LINC00311Q8N616 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
LINC00311Q8N616 PCDHA1-201ENST00000378133 2726 ntBASIC13.24□□□□□ -0.29
LINC00311Q8N616 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
LINC00311Q8N616 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
LINC00311Q8N616 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
LINC00311Q8N616 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC13.23□□□□□ -0.29
LINC00311Q8N616 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
LINC00311Q8N616 AP001282.1-201ENST00000531301 1499 ntBASIC13.23□□□□□ -0.29
LINC00311Q8N616 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC13.23□□□□□ -0.29
LINC00311Q8N616 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
LINC00311Q8N616 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC13.23□□□□□ -0.29
LINC00311Q8N616 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
LINC00311Q8N616 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
LINC00311Q8N616 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC13.23□□□□□ -0.29
LINC00311Q8N616 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
LINC00311Q8N616 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
LINC00311Q8N616 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
LINC00311Q8N616 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC13.23□□□□□ -0.29
LINC00311Q8N616 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
LINC00311Q8N616 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC13.23□□□□□ -0.29
LINC00311Q8N616 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
LINC00311Q8N616 COA5-202ENST00000409997 557 ntTSL 4 BASIC13.23□□□□□ -0.29
LINC00311Q8N616 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
LINC00311Q8N616 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC13.23□□□□□ -0.29
LINC00311Q8N616 CEND1P1-201ENST00000451006 455 ntBASIC13.23□□□□□ -0.29
LINC00311Q8N616 TIMM8BP1-201ENST00000452384 211 ntBASIC13.23□□□□□ -0.29
LINC00311Q8N616 LINC02447-202ENST00000501888 2146 ntBASIC13.23□□□□□ -0.29
LINC00311Q8N616 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
LINC00311Q8N616 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC13.23□□□□□ -0.29
LINC00311Q8N616 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC13.23□□□□□ -0.29
LINC00311Q8N616 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC13.23□□□□□ -0.29
LINC00311Q8N616 MIR3687-2-201ENST00000577708 61 ntBASIC13.23□□□□□ -0.29
LINC00311Q8N616 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC13.23□□□□□ -0.29
LINC00311Q8N616 MIR3687-1-201ENST00000614492 61 ntBASIC13.23□□□□□ -0.29
LINC00311Q8N616 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
LINC00311Q8N616 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC13.23□□□□□ -0.29
LINC00311Q8N616 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
LINC00311Q8N616 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
LINC00311Q8N616 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
LINC00311Q8N616 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC13.23□□□□□ -0.29
LINC00311Q8N616 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
LINC00311Q8N616 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
LINC00311Q8N616 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
LINC00311Q8N616 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
LINC00311Q8N616 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
LINC00311Q8N616 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC13.23□□□□□ -0.29
LINC00311Q8N616 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
LINC00311Q8N616 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
LINC00311Q8N616 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC13.23□□□□□ -0.29
LINC00311Q8N616 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC13.23□□□□□ -0.29
LINC00311Q8N616 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
LINC00311Q8N616 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
LINC00311Q8N616 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
LINC00311Q8N616 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC13.23□□□□□ -0.29
LINC00311Q8N616 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
LINC00311Q8N616 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
LINC00311Q8N616 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
LINC00311Q8N616 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
LINC00311Q8N616 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms